DMR 11109 chr1:207990601-207990750 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:207990601-207990750 (View on UCSC) |
| Width | 150bp |
| Genomic Context | promoter |
| Nearest Genes | mir-29b-2 (0bp away) |
| ANODEV p-value | 0.00117391126574 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11109 | mir-29b-2 | 2494 | uc001hgr.2 | chr1 | 207974867 | 207996048 | - | 150 | 100.0 | 2.35 | 1 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (100), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
| 11109 | mir-29b-2 | 2494 | uc009xcm.1 | chr1 | 207974867 | 207996048 | - | 150 | 100.0 | 2.27 | 1 | 0.0 | E1 (0), I1 (0), E2 (100), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) | 0.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 11109 | chr1 | 207990666 | 207990915 | wgEncodeRegDnaseClusteredV2 | 5 | score:218, srow:98687 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 11109 | cellmeth_recounts | PrEC: 1, LNCaP: 37, DU145: 0 |  |
| 11109 | cellmeth_diffreps_PrECvsLNCaP | A=1, B=30, Length=400, Event=Up, log2FC=4.91, padj=3.44017137846935e-07 |  |
| 11109 | cellmeth_diffreps_LNCaPvsDU145 | A=32.07, B=0, Length=420, Event=Down, log2FC=-Inf, padj=9.58765614131309e-09 |  |
| 11109 | cellexp | id=ENSG00000203709, name=C1orf132, PrEC=13, str=34, LNCaP=31, str=6, DU145=7, str=2 |  |