DMR 11112 chr1:208211701-208211900 (200bp)

DMR Stats
Positionchr1:208211701-208211900 (View on UCSC)
Width200bp
Genomic Contextexon
Nearest GenesPLXNA2 (0bp away)
ANODEV p-value0.00325008935814
FrequenciesBenign: 5.0 (71.43%), Low: 1.0 (16.67%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
11112 PLXNA2 2498 uc001hgz.3 chr1 208195588 208417665 - 200 100.0 1.09 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (0), E17 (0), I17 (0), E18 (0), I18 (0), E19 (0), I19 (0), E20 (0), I20 (0), E21 (0), I21 (0), E22 (0), I22 (0), E23 (0), I23 (0), E24 (0), I24 (0), E25 (0), I25 (41), E26 (52), I26 (7.5), E27 (0), I27 (0), E28 (0), I28 (0), E29 (0), I29 (0), E30 (0), I30 (0), E31 (0), I31 (0), E32 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
11112 chr1 208211686 208211875 wgEncodeRegDnaseClusteredV2 2 score:118, srow:98919
11112 chr1 208211715 208211735 tfbsConsSites V$PAX6_01 score:761, zScore:1.78, srow:432694
11112 chr1 208211753 208211767 tfbsConsSites V$CDPCR3_01 score:786, zScore:1.65, srow:432695
11112 chr1 208211802 208211817 tfbsConsSites V$ARP1_01 score:808, zScore:2.05, srow:432696
11112 chr1 208211808 208211815 tfbsConsSites V$E2F_02 score:896, zScore:2.02, srow:432697
11112 chr1 208211783 208211783 cosmic COSM1338477 srow:105775
11112 chr1 208211813 208211813 cosmic COSM1560305 srow:105776
11112 chr1 208211712 208211718 phastConsElements100way lod=85 score:433, srow:741889
11112 chr1 208211720 208211730 phastConsElements100way lod=95 score:444, srow:741890
11112 chr1 208211732 208211751 phastConsElements100way lod=231 score:532, srow:741891
11112 chr1 208211753 208211757 phastConsElements100way lod=43 score:366, srow:741892
11112 chr1 208211759 208211778 phastConsElements100way lod=262 score:545, srow:741893
11112 chr1 208211780 208211790 phastConsElements100way lod=85 score:433, srow:741894
11112 chr1 208211792 208211793 phastConsElements100way lod=24 score:308, srow:741895
11112 chr1 208211795 208211796 phastConsElements100way lod=17 score:274, srow:741896
11112 chr1 208211798 208211799 phastConsElements100way lod=34 score:343, srow:741897
11112 chr1 208211801 208211824 phastConsElements100way lod=256 score:542, srow:741898
  • 17 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
11112 cellmeth_recounts PrEC: 4, LNCaP: 0, DU145: 5
11112 cellexp id=ENSG00000076356, name=PLXNA2, PrEC=10847, str=4761, LNCaP=99, str=35, DU145=1029, str=603
11112 tcgaexp gene=PLXNA2, entrez=5362, pos=chr1:208195588-208417665(-), B=1913, L=1172, M=1175, H=1160