DMR 11330 chr1:247200501-247200650 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:247200501-247200650 (View on UCSC) |
| Width | 150bp |
| Genomic Context | exon |
| Nearest Genes | ZNF670-ZNF695, ZNF670 (0bp away) |
| ANODEV p-value | 0.021123697059 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 1.0 (11.11 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11330 | ZNF670-ZNF695 | 2808 | uc001ica.3 | chr1 | 247108849 | 247242115 | - | 150 | 100.0 | 0.13 | 1 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) | 0.0 |
| 11330 | ZNF670-ZNF695 | 2808 | uc001icb.2 | chr1 | 247130964 | 247242115 | - | 150 | 100.0 | 0.09 | 1 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
| 11330 | ZNF670 | 2809 | uc001icd.2 | chr1 | 247197940 | 247242115 | - | 150 | 100.0 | 0.09 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (100) | 0.0 |
| 11330 | ZNF670 | 2809 | uc021plz.1 | chr1 | 247197940 | 247242115 | - | 150 | 100.0 | 0.13 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (100) | 0.0 |
- 4 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 11330 | chr1 | 247200505 | 247201763 | wgEncodeRegTfbsClusteredV3 | ZNF274 | score:1000, expCount:6, expNums:281,323,456,554,555,580, expScores:430,214,219,223,713,706, srow:436006 |
| 11330 | chr1 | 247200507 | 247201639 | wgEncodeRegTfbsClusteredV3 | SETDB1 | score:501, expCount:2, expNums:532,589, expScores:104,369, srow:436007 |
| 11330 | chr1 | 247200554 | 247201851 | wgEncodeRegTfbsClusteredV3 | KAP1 | score:790, expCount:1, expNums:508, expScores:272, srow:436008 |
- 3 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 11330 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 1 |  |
| 11330 | cellexp | id=ENSG00000135747, name=ZNF670, PrEC=244, str=195, LNCaP=280, str=484, DU145=357, str=451 |  |
| 11330 | tcgameth | site:cg04346743, B=0.91, L=0.89, H=0.89 |  |
| 11330 | tcgaexp | gene=ZNF670, entrez=93474, pos=chr1:247197940-247242115(-), B=155, L=173, M=180, H=203 |  |