DMR 11778 chr2:86780601-86780800 (200bp)

DMR Stats
Positionchr2:86780601-86780800 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesCHMP3, RNF103-CHMP3 (0bp away)
ANODEV p-value0.0100737343249
FrequenciesBenign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
11778 CHMP3 16619 uc002srj.3 chr2 86730553 86790620 - 200 100.0 0.11 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
11778 CHMP3 16619 uc002srk.3 chr2 86730553 86790620 - 200 100.0 0.08 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) 0.0
11778 CHMP3 16619 uc002srl.3 chr2 86730553 86790620 - 200 100.0 0.14 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
11778 RNF103-CHMP3 16619 uc010ytl.2 chr2 86730553 86948245 - 200 100.0 0.19 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
11778 CHMP3 16619 uc021vkf.1 chr2 86730553 86790620 - 200 100.0 0.08 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
  • 5 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
11778 cellmeth_recounts PrEC: 7, LNCaP: 9, DU145: 8
11778 cellexp id=ENSG00000115561, name=CHMP3, PrEC=5953, str=5310, LNCaP=2190, str=2508, DU145=2864, str=3972
11778 cellexp id=ENSG00000249884, name=RNF103-CHMP3, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0
11778 tcgaexp gene=CHMP3, entrez=51652, pos=chr2:86730553-86790620(-), B=10382, L=8927, M=8710, H=8645