DMR 12048 chr2:158598851-158599050 (200bp)

DMR Stats
Positionchr2:158598851-158599050 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesACVR1 (0bp away)
ANODEV p-value0.00075301491461
FrequenciesBenign: 5.0 (71.43%), Low: 0.0 (0.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
12048 ACVR1 17177 uc002tzm.3 chr2 158592958 158694790 - 200 100.0 0.14 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (100), E11 (0), I11 (0), E12 (0) 0.0
12048 ACVR1 17177 uc002tzn.3 chr2 158592958 158731623 - 200 100.0 0.14 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (100), E10 (0), I10 (0), E11 (0) 0.0
12048 ACVR1 17177 uc010fog.2 chr2 158592958 158732374 - 200 100.0 0.14 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (100), E10 (0), I10 (0), E11 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
12048 chr2 158598406 158598975 wgEncodeRegDnaseClusteredV2 7 score:135, srow:660117
12048 chr2 158598953 158598963 tfbsConsSites V$AP1FJ_Q2 score:914, zScore:1.84, srow:2816269
12048 chr2 158599033 158599040 tfbsConsSites V$TBP_01 score:979, zScore:1.84, srow:2816270
12048 chr2 158598955 158598960 phastConsElements100way lod=22 score:300, srow:4880368
12048 chr2 158598990 158598994 phastConsElements100way lod=20 score:290, srow:4880369
12048 chr2 158599009 158599013 phastConsElements100way lod=14 score:255, srow:4880370
12048 chr2 158599032 158599036 phastConsElements100way lod=12 score:240, srow:4880371
  • 7 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
12048 cellmeth_recounts PrEC: 1, LNCaP: 0, DU145: 0
12048 cellexp id=ENSG00000115170, name=ACVR1, PrEC=2521, str=7265, LNCaP=673, str=805, DU145=1314, str=1505
12048 tcgaexp gene=ACVR1, entrez=90, pos=chr2:158592958-158732374(-), B=1862, L=1692, M=1710, H=1940