DMR 12511 chr3:13249151-13249350 (200bp)

DMR Stats
Positionchr3:13249151-13249350 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesNUP210 (108386bp away)
ANODEV p-value0.0221045550218
FrequenciesBenign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
12511 chr3 13248706 13249315 wgEncodeRegDnaseClusteredV2 6 score:245, srow:787916
12511 chr3 13249312 13249325 tfbsConsSites V$SRF_Q6 score:811, zScore:1.68, srow:3301397
12511 chr3 13248213 13250212 cpgShelf — values(x.gr)[overs$srow, ]:27544
  • 3 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
12511 cellmeth_recounts PrEC: 8, LNCaP: 0, DU145: 3
12511 cellmeth_diffreps_PrECvsLNCaP A=12, B=0, Length=320, Event=Down, log2FC=-Inf, padj=0.00157949948552458
12511 cellmeth_diffreps_PrECvsDU145 A=12, B=0, Length=280, Event=Down, log2FC=-Inf, padj=0.00174045876043459