DMR 12661 chr3:49083501-49083700 (200bp)

DMR Stats
Positionchr3:49083501-49083700 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesQRICH1 (0bp away)
ANODEV p-value0.000829415735365
FrequenciesBenign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
12661 QRICH1 20145 uc003cvu.3 chr3 49067142 49131504 - 200 100.0 1.05 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
12661 QRICH1 20145 uc003cvv.3 chr3 49067142 49131504 - 200 100.0 0.54 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) 0.0
12661 QRICH1 20145 uc010hkq.3 chr3 49067142 49130902 - 200 100.0 0.34 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (100), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
12661 chr3 49083663 49083675 phastConsElements100way lod=16 score:268, srow:5812679
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
12661 cellmeth_recounts PrEC: 10, LNCaP: 9, DU145: 1
12661 cellmeth_diffreps_PrECvsDU145 A=11, B=0, Length=220, Event=Down, log2FC=-Inf, padj=0.00313959514768542
12661 cellexp id=ENSG00000198218, name=QRICH1, PrEC=5993, str=6393, LNCaP=4826, str=6154, DU145=5003, str=5796
12661 tcgaexp gene=QRICH1, entrez=54870, pos=chr3:49067142-49131504(-), B=3887, L=3753, M=3725, H=4107