DMR 12677 chr3:50178351-50178500 (150bp)
| DMR Stats | |
|---|---|
| Position | chr3:50178351-50178500 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | AK125500 (0bp away) |
| ANODEV p-value | 0.0165605321437 |
| Frequencies | Benign: 5.0 (71.43%), Low: 1.0 (16.67%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12677 | AK125500 | 20181 | uc003cyi.1 | chr3 | 50153455 | 50193518 | - | 150 | 100.0 | 1.56 | 1 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) | 0.0 |
- 1 genes
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 12677 | cellmeth_recounts | PrEC: 17, LNCaP: 0, DU145: 0 |  |
| 12677 | cellmeth_diffreps_PrECvsLNCaP | A=54, B=4, Length=640, Event=Down, log2FC=-3.75, padj=7.53142151508654e-11 |  |
| 12677 | cellmeth_diffreps_PrECvsDU145 | A=55, B=0, Length=680, Event=Down, log2FC=-Inf, padj=0 |  |
| 12677 | cellexp | id=ENSG00000235016, name=RP11-493K19.3, PrEC=19, str=43, LNCaP=31, str=24, DU145=10, str=22 |  |