DMR 133 chr1:15089051-15089200 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:15089051-15089200 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | KAZN (0bp away) |
| ANODEV p-value | 0.0183338950139 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133 | KAZN | 266 | uc001avm.4 | chr1 | 14925213 | 15444544 | + | 150 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0) | 0.0 |
| 133 | KAZN | 266 | uc009vog.1 | chr1 | 14925213 | 15394651 | + | 150 | 100.0 | 0.05 | 0 | 0.0 | E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) | 0.0 |
- 2 geness
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 133 | cellmeth_recounts | PrEC: 1, LNCaP: 0, DU145: 1 |  |
| 133 | cellexp | id=ENSG00000189337, name=KAZN, PrEC=1257, str=890, LNCaP=399, str=388, DU145=394, str=284 |  |
| 133 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 |  |
| 133 | tcgaexp | gene=KAZN, entrez=23254, pos=chr1:14925213-15444544(+), B=906, L=624, M=603, H=638 |  |
| 133 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |