DMR 13551 chr4:41269451-41269600 (150bp)

DMR Stats
Positionchr4:41269451-41269600 (View on UCSC)
Width150bp
Genomic Context3' end
Nearest GenesUCHL1 (0bp away)
ANODEV p-value0.00389160901016
FrequenciesBenign: 6.0 (85.71%), Low: 2.0 (33.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
13551 UCHL1 21545 uc003gvo.3 chr4 41258898 41270446 + 150 100.0 1.26 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (100), E9 (0) 100.0
13551 UCHL1 21545 uc003gvp.3 chr4 41258898 41270446 + 150 100.0 1.26 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (100), E8 (0) 100.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
13551 chr4 41269566 41269569 phastConsElements100way lod=12 score:240, srow:6463500
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
13551 cellmeth_recounts PrEC: 3, LNCaP: 1, DU145: 6
13551 cellexp id=ENSG00000154277, name=UCHL1, PrEC=395, str=1630, LNCaP=320, str=83, DU145=44263, str=39948
13551 tcgaexp gene=UCHL1, entrez=7345, pos=chr4:41258898-41270446(+), B=727, L=321, M=356, H=562
13551 tcgaexp gene=UGT2B10, entrez=7365, pos=chr4:393964-69886113(+), B=12, L=1, M=2, H=8
13551 tcgaexp gene=UGT2A3, entrez=79799, pos=chr4:506428-69817509(-), B=1, L=0, M=1, H=1
13551 tcgaexp gene=YTHDC1, entrez=91746, pos=chr4:6027-69215824(-), B=4512, L=3976, M=4109, H=4458
13551 tcgaexp gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0