DMR 137 chr1:16291701-16291900 (200bp)
| DMR Stats | |
|---|---|
| Position | chr1:16291701-16291900 (View on UCSC) |
| Width | 200bp |
| Genomic Context | intron |
| Nearest Genes | ZBTB17 (0bp away) |
| ANODEV p-value | 0.00207817232845 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137 | ZBTB17 | 288 | uc001axl.4 | chr1 | 16268364 | 16302627 | - | 200 | 100.0 | 0.05 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) | 0.0 |
| 137 | ZBTB17 | 288 | uc009vom.1 | chr1 | 16271432 | 16302627 | - | 200 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
| 137 | ZBTB17 | 288 | uc009von.1 | chr1 | 16274238 | 16302627 | - | 200 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (100), E2 (0) | 0.0 |
| 137 | ZBTB17 | 288 | uc010obq.2 | chr1 | 16268364 | 16302627 | - | 200 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0) | 0.0 |
| 137 | ZBTB17 | 288 | uc010obr.2 | chr1 | 16268364 | 16302627 | - | 200 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) | 0.0 |
| 137 | ZBTB17 | 288 | uc010obs.2 | chr1 | 16268364 | 16302627 | - | 200 | 100.0 | 0.05 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) | 0.0 |
| 137 | ZBTB17 | 288 | uc010obt.1 | chr1 | 16270322 | 16302627 | - | 200 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) | 0.0 |
| 137 | ZBTB17 | 288 | uc010obu.2 | chr1 | 16270365 | 16302627 | - | 200 | 100.0 | 0.04 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) | 0.0 |
| 137 | ZBTB17 | 288 | uc010obv.1 | chr1 | 16272257 | 16302627 | - | 200 | 100.0 | 0.12 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0) | 0.0 |
- 9 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 137 | chr1 | 16291721 | 16292290 | wgEncodeRegDnaseClusteredV2 | 74 | score:1000, srow:12492 |
| 137 | chr1 | 16291599 | 16292228 | wgEncodeRegTfbsClusteredV3 | STAT5A | score:317, expCount:1, expNums:114, expScores:317, srow:41269 |
| 137 | chr1 | 16291616 | 16292211 | wgEncodeRegTfbsClusteredV3 | NFATC1 | score:359, expCount:1, expNums:96, expScores:359, srow:41270 |
| 137 | chr1 | 16291636 | 16292015 | wgEncodeRegTfbsClusteredV3 | TBP | score:207, expCount:1, expNums:317, expScores:207, srow:41271 |
| 137 | chr1 | 16291701 | 16292147 | wgEncodeRegTfbsClusteredV3 | RELA | score:484, expCount:7, expNums:282,300,325,331,333,335,339, expScores:314,355,484,367,187,257,285, srow:41272 |
| 137 | chr1 | 16291709 | 16292118 | wgEncodeRegTfbsClusteredV3 | STAT3 | score:123, expCount:1, expNums:315, expScores:123, srow:41273 |
| 137 | chr1 | 16291722 | 16292131 | wgEncodeRegTfbsClusteredV3 | TBL1XR1 | score:152, expCount:1, expNums:316, expScores:152, srow:41274 |
| 137 | chr1 | 16291725 | 16292214 | wgEncodeRegTfbsClusteredV3 | POLR2A | score:356, expCount:1, expNums:306, expScores:356, srow:41275 |
| 137 | chr1 | 16291743 | 16292098 | wgEncodeRegTfbsClusteredV3 | BCL3 | score:157, expCount:1, expNums:83, expScores:157, srow:41276 |
| 137 | chr1 | 16291743 | 16292056 | wgEncodeRegTfbsClusteredV3 | RUNX3 | score:1000, expCount:1, expNums:109, expScores:1000, srow:41277 |
| 137 | chr1 | 16291752 | 16292072 | wgEncodeRegTfbsClusteredV3 | NFIC | score:302, expCount:1, expNums:97, expScores:302, srow:41278 |
| 137 | chr1 | 16291760 | 16292089 | wgEncodeRegTfbsClusteredV3 | IRF4 | score:388, expCount:1, expNums:92, expScores:388, srow:41279 |
| 137 | chr1 | 16291769 | 16292020 | wgEncodeRegTfbsClusteredV3 | POU2F2 | score:1000, expCount:2, expNums:106,125, expScores:1000,644, srow:41280 |
| 137 | chr1 | 16291775 | 16292084 | wgEncodeRegTfbsClusteredV3 | PAX5 | score:240, expCount:1, expNums:101, expScores:240, srow:41281 |
| 137 | chr1 | 16291789 | 16292084 | wgEncodeRegTfbsClusteredV3 | MEF2C | score:251, expCount:1, expNums:94, expScores:251, srow:41282 |
| 137 | chr1 | 16291796 | 16292189 | wgEncodeRegTfbsClusteredV3 | EP300 | score:383, expCount:3, expNums:99,263,305, expScores:126,169,383, srow:41283 |
| 137 | chr1 | 16291803 | 16292089 | wgEncodeRegTfbsClusteredV3 | SPI1 | score:330, expCount:2, expNums:107,126, expScores:196,330, srow:41284 |
| 137 | chr1 | 16291804 | 16291993 | wgEncodeRegTfbsClusteredV3 | ATF2 | score:490, expCount:1, expNums:79, expScores:490, srow:41285 |
| 137 | chr1 | 16291808 | 16292047 | wgEncodeRegTfbsClusteredV3 | EGR1 | score:217, expCount:1, expNums:87, expScores:217, srow:41286 |
| 137 | chr1 | 16291831 | 16291954 | wgEncodeRegTfbsClusteredV3 | MEF2A | score:419, expCount:1, expNums:93, expScores:419, srow:41287 |
| 137 | chr1 | 16291836 | 16292242 | wgEncodeRegTfbsClusteredV3 | EBF1 | score:538, expCount:2, expNums:86,292, expScores:435,538, srow:41288 |
| 137 | chr1 | 16291840 | 16291985 | wgEncodeRegTfbsClusteredV3 | FOXM1 | score:494, expCount:1, expNums:90, expScores:494, srow:41289 |
| 137 | chr1 | 16291853 | 16291952 | wgEncodeRegTfbsClusteredV3 | SP1 | score:330, expCount:1, expNums:112, expScores:330, srow:41290 |
| 137 | chr1 | 16291857 | 16292003 | wgEncodeRegTfbsClusteredV3 | BCL11A | score:564, expCount:1, expNums:82, expScores:564, srow:41291 |
| 137 | chr1 | 16291861 | 16291985 | wgEncodeRegTfbsClusteredV3 | BATF | score:489, expCount:1, expNums:81, expScores:489, srow:41292 |
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Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 137 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 1 |  |
| 137 | cellexp | id=ENSG00000116809, name=ZBTB17, PrEC=1483, str=1406, LNCaP=989, str=679, DU145=1203, str=954 |  |
| 137 | tcgaexp | gene=ZBTB17, entrez=7709, pos=chr1:16268364-16302627(-), B=1257, L=1520, M=1420, H=1337 |  |
| 137 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 |  |
| 137 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |