DMR 13982 chr5:651501-651700 (200bp)
| DMR Stats | |
|---|---|
| Position | chr5:651501-651700 (View on UCSC) |
| Width | 200bp |
| Genomic Context | intron |
| Nearest Genes | CEP72 (0bp away) |
| ANODEV p-value | 0.00231575826078 |
| Frequencies | Benign: 6.0 (85.71%), Low: 2.0 (33.33%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13982 | CEP72 | 22384 | uc003jbf.3 | chr5 | 612405 | 653666 | + | 200 | 100.0 | 0.03 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (100), E12 (0) | 0.0 |
- 1 genes
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 13982 | cellmeth_recounts | PrEC: 23, LNCaP: 5, DU145: 8 |  |
| 13982 | cellmeth_diffreps_PrECvsLNCaP | A=34, B=5, Length=380, Event=Down, log2FC=-2.77, padj=4.44240505496598e-05 |  |
| 13982 | cellmeth_diffreps_PrECvsDU145 | A=34, B=6, Length=360, Event=Down, log2FC=-2.5, padj=0.000186604078182962 |  |
| 13982 | cellexp | id=ENSG00000112877, name=CEP72, PrEC=685, str=254, LNCaP=394, str=458, DU145=1049, str=1342 |  |
| 13982 | tcgaexp | gene=CEP72, entrez=55722, pos=chr5:612405-653666(+), B=115, L=129, M=135, H=149 |  |