DMR 1411 chr2:230222551-230223000 (450bp)

DMR Stats
Positionchr2:230222551-230223000 (View on UCSC)
Width450bp
Genomic Context3' end
Nearest GenesDNER (0bp away)
ANODEV p-value0.00518811474899
FrequenciesBenign: 6.0 (85.71%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
1411 DNER 17694 uc002vpv.3 chr2 230222345 230579286 - 450 100.0 3.65 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (100) 100.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
1411 chr2 230222676 230222682 tfbsConsSites V$SRY_01 score:1000, zScore:1.69, srow:3008039
1411 chr2 230222775 230222789 tfbsConsSites V$EVI1_04 score:816, zScore:1.83, srow:3008040
1411 chr2 230222792 230222801 tfbsConsSites V$NKX22_01 score:873, zScore:1.66, srow:3008041
1411 chr2 230222808 230222821 tfbsConsSites V$FAC1_01 score:833, zScore:1.64, srow:3008042
1411 chr2 230222809 230222826 tfbsConsSites V$FOXJ2_01 score:935, zScore:2.59, srow:3008043
1411 chr2 230222812 230222826 tfbsConsSites V$HNF3B_01 score:918, zScore:2.78, srow:3008044
1411 chr2 230222813 230222824 tfbsConsSites V$FOXD3_01 score:888, zScore:1.73, srow:3008045
1411 chr2 230222834 230222845 tfbsConsSites V$E4BP4_01 score:847, zScore:2.14, srow:3008046
1411 chr2 230222835 230222844 tfbsConsSites V$HLF_01 score:869, zScore:1.74, srow:3008047
1411 chr2 230222836 230222843 tfbsConsSites V$CREBP1_01 score:865, zScore:1.65, srow:3008048
1411 chr2 230222951 230222960 tfbsConsSites V$HLF_01 score:877, zScore:1.89, srow:3008049
1411 chr2 230222961 230222979 tfbsConsSites V$SEF1_C score:790, zScore:3.05, srow:3008050
1411 chr2 230222962 230222967 tfbsConsSites V$AML1_01 score:1000, zScore:1.78, srow:3008051
1411 chr2 230222535 230222555 phastConsElements100way lod=67 score:410, srow:5191899
1411 chr2 230222557 230222567 phastConsElements100way lod=19 score:285, srow:5191900
1411 chr2 230222574 230222584 phastConsElements100way lod=69 score:413, srow:5191901
1411 chr2 230222586 230222587 phastConsElements100way lod=18 score:280, srow:5191902
1411 chr2 230222605 230222611 phastConsElements100way lod=15 score:262, srow:5191903
1411 chr2 230222616 230222620 phastConsElements100way lod=21 score:295, srow:5191904
1411 chr2 230222642 230222654 phastConsElements100way lod=42 score:363, srow:5191905
1411 chr2 230222657 230222663 phastConsElements100way lod=17 score:274, srow:5191906
1411 chr2 230222666 230222698 phastConsElements100way lod=69 score:413, srow:5191907
1411 chr2 230222701 230222710 phastConsElements100way lod=49 score:379, srow:5191908
1411 chr2 230222713 230222874 phastConsElements100way lod=834 score:659, srow:5191909
1411 chr2 230222885 230222914 phastConsElements100way lod=206 score:521, srow:5191910
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  • 25 of 28 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
1411 cellmeth_recounts PrEC: 3, LNCaP: 0, DU145: 6
1411 cellexp id=ENSG00000187957, name=DNER, PrEC=176, str=80, LNCaP=2, str=9, DU145=110, str=65
1411 tcgameth site:cg17165432, B=0.89, L=0.91, H=0.89
1411 tcgaexp gene=DNER, entrez=92737, pos=chr2:230222345-230579286(-), B=461, L=100, M=321, H=351