DMR 14582 chr5:179204601-179204750 (150bp)
| DMR Stats | |
|---|---|
| Position | chr5:179204601-179204750 (View on UCSC) |
| Width | 150bp |
| Genomic Context | 3' end |
| Nearest Genes | MAML1 (0bp away) |
| ANODEV p-value | 0.000887370594539 |
| Frequencies | Benign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14582 | MAML1 | 23566 | uc003mkn.1 | chr5 | 179159851 | 179223512 | + | 150 | 100.0 | 1.33 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 14582 | chr5 | 179204546 | 179204755 | wgEncodeRegDnaseClusteredV2 | 2 | score:165, srow:994388 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 14582 | cellmeth_recounts | PrEC: 11, LNCaP: 1, DU145: 4 |  |
| 14582 | cellmeth_diffreps_PrECvsLNCaP | A=16, B=1, Length=340, Event=Down, log2FC=-4, padj=0.00219227506621541 |  |
| 14582 | cellmeth_diffreps_PrECvsDU145 | A=16, B=1, Length=340, Event=Down, log2FC=-4, padj=0.00241302194969176 |  |
| 14582 | cellexp | id=ENSG00000161021, name=MAML1, PrEC=3169, str=2378, LNCaP=4075, str=3409, DU145=4413, str=3819 |  |
| 14582 | tcgaexp | gene=MAML1, entrez=9794, pos=chr5:179159851-179223512(+), B=3052, L=3179, M=3238, H=3720 |  |