DMR 146 chr1:19110851-19111000 (150bp)

DMR Stats
Positionchr1:19110851-19111000 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesPAX7 (35490bp away)
ANODEV p-value0.009499555545
FrequenciesBenign: 7.0 (100.0%), Low: 6.0 (100.0%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
146 chr1 19110946 19111255 wgEncodeRegDnaseClusteredV2 4 score:288, srow:14997
146 chr1 19110464 19111247 wgEncodeRegTfbsClusteredV3 EZH2 score:239, expCount:1, expNums:36, expScores:239, srow:49001
146 chr1 19110768 19110890 phastConsElements100way lod=1600 score:724, srow:72568
146 chr1 19110894 19110908 phastConsElements100way lod=170 score:502, srow:72569
146 chr1 19110926 19110953 phastConsElements100way lod=189 score:512, srow:72570
146 chr1 19110956 19111082 phastConsElements100way lod=1429 score:713, srow:72571
146 chr1 19110721 19110932 cpgIsland CpG: 19 length:212, cpgNum:19, gcNum:116, perCpg:17.9, perGc:54.7, obsExp:1.21, srow:562
146 chr1 19110933 19112932 cpgShore — values(x.gr)[overs$srow, ]:977
  • 8 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
146 cellmeth_recounts PrEC: 6, LNCaP: 3, DU145: 10
146 tcgameth site:cg19637330, B=0.48, L=0.6, H=0.61
146 tcgameth site:cg26220594, B=0.42, L=0.5, H=0.59
146 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
146 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305