DMR 15676 chr7:73111901-73112100 (200bp)

DMR Stats
Positionchr7:73111901-73112100 (View on UCSC)
Width200bp
Genomic Context3' end
Nearest GenesWBSCR22 (0bp away)
ANODEV p-value0.000659435139755
FrequenciesBenign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
15676 WBSCR22 27172 uc003tyt.3 chr7 73097898 73112551 + 200 100.0 1.62 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (17), E11 (45), I11 (38.5), E12 (0) 100.0
15676 WBSCR22 27172 uc003tyu.3 chr7 73097898 73112551 + 200 100.0 0.48 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (17), E12 (45), I12 (38.5), E13 (0) 100.0
15676 WBSCR22 27172 uc003tyv.3 chr7 73097898 73112551 + 200 100.0 0.48 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (17), E11 (45), I11 (38.5), E12 (0) 100.0
15676 WBSCR22 27172 uc003tyw.1 chr7 73097898 73119491 + 200 100.0 0.48 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (17), E9 (45), I9 (38.5), E10 (0) 0.0
15676 WBSCR22 27172 uc022afv.1 chr7 73097898 73112551 + 200 100.0 0.48 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (17), E10 (45), I10 (38.5), E11 (0) 100.0
  • 5 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
15676 chr7 73111106 73112421 wgEncodeRegTfbsClusteredV3 POLR2A score:362, expCount:3, expNums:61,62,275, expScores:322,360,362, srow:3786687
15676 chr7 73112015 73112034 tfbsConsSites V$ARNT_02 score:791, zScore:1.96, srow:4855330
15676 chr7 73112022 73112031 tfbsConsSites V$HMX1_01 score:816, zScore:1.78, srow:4855331
15676 chr7 73111951 73111951 cosmic COSM1091593 srow:1085141
15676 chr7 73111952 73111952 cosmic COSM1091594 srow:1085142
15676 chr7 73111966 73111966 cosmic COSM747157 srow:1085143
15676 chr7 73112020 73112020 cosmic COSM1313273 srow:1085144
15676 chr7 73111933 73111935 phastConsElements100way lod=31 score:333, srow:8398896
15676 chr7 73111945 73111947 phastConsElements100way lod=14 score:255, srow:8398897
15676 chr7 73111954 73111958 phastConsElements100way lod=32 score:337, srow:8398898
15676 chr7 73111964 73111979 phastConsElements100way lod=108 score:457, srow:8398899
15676 chr7 73111981 73112006 phastConsElements100way lod=242 score:537, srow:8398900
15676 chr7 73112012 73112030 phastConsElements100way lod=174 score:504, srow:8398901
  • 13 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
15676 cellmeth_recounts PrEC: 16, LNCaP: 3, DU145: 0
15676 cellmeth_diffreps_PrECvsLNCaP A=50, B=3, Length=620, Event=Down, log2FC=-4.06, padj=1.16446047036874e-10
15676 cellmeth_diffreps_PrECvsDU145 A=52, B=4, Length=600, Event=Down, log2FC=-3.7, padj=3.51197352327244e-10
15676 cellexp id=ENSG00000071462, name=WBSCR22, PrEC=4663, str=2703, LNCaP=5511, str=4766, DU145=5623, str=5881
15676 tcgaexp gene=PMS2L2, entrez=5380, pos=chr7:72476589-74988306(+), B=123, L=112, M=116, H=123
15676 tcgaexp gene=WBSCR22, entrez=114049, pos=chr7:73097898-73119491(+), B=3526, L=3697, M=3736, H=3481
15676 tcgaexp gene=SPDYE8P, entrez=389517, pos=chr7:72490260-74974606(+), B=25, L=28, M=31, H=31