DMR 16230 chr8:11400801-11400950 (150bp)
| DMR Stats | |
|---|---|
| Position | chr8:11400801-11400950 (View on UCSC) |
| Width | 150bp |
| Genomic Context | exon |
| Nearest Genes | BLK (0bp away) |
| ANODEV p-value | 0.0118173934128 |
| Frequencies | Benign: 7.0 (100.0%), Low: 2.0 (33.33%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16230 | BLK | 28184 | uc003wty.3 | chr8 | 11351521 | 11422108 | + | 150 | 100.0 | 0.52 | 0 | 0.0 | E1 (0), I1 (0), E2 (37.33), I2 (63.33), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 16230 | chr8 | 11400906 | 11401310 | wgEncodeRegDnaseClusteredV2 | 4 | score:139, srow:1142520 |
| 16230 | chr8 | 11400815 | 11400833 | tfbsConsSites | V$PAX2_01 | score:787, zScore:2.07, srow:5042673 |
| 16230 | chr8 | 11400854 | 11400868 | tfbsConsSites | V$BACH1_01 | score:792, zScore:1.65, srow:5042674 |
| 16230 | chr8 | 11400854 | 11400870 | tfbsConsSites | V$HNF1_C | score:836, zScore:2.52, srow:5042675 |
| 16230 | chr8 | 11400856 | 11400866 | tfbsConsSites | V$BACH2_01 | score:875, zScore:1.86, srow:5042676 |
| 16230 | chr8 | 11400809 | 11400809 | cosmic | COSM1242036 | srow:1132026 |
| 16230 | chr8 | 11400826 | 11400826 | cosmic | COSM453887 | srow:1132027 |
| 16230 | chr8 | 11400835 | 11400835 | cosmic | COSM292681 | srow:1132028 |
| 16230 | chr8 | 11400849 | 11400849 | cosmic | COSM1246131 | srow:1132029 |
| 16230 | chr8 | 11400800 | 11400807 | phastConsElements100way | lod=35 | score:345, srow:8717280 |
| 16230 | chr8 | 11400811 | 11400814 | phastConsElements100way | lod=20 | score:290, srow:8717281 |
| 16230 | chr8 | 11400836 | 11400840 | phastConsElements100way | lod=16 | score:268, srow:8717282 |
| 16230 | chr8 | 11400845 | 11400849 | phastConsElements100way | lod=24 | score:308, srow:8717283 |
| 16230 | chr8 | 11400851 | 11400864 | phastConsElements100way | lod=68 | score:411, srow:8717284 |
- 14 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 16230 | cellmeth_recounts | PrEC: 9, LNCaP: 1, DU145: 3 |  |
| 16230 | cellmeth_diffreps_PrECvsLNCaP | A=14, B=0, Length=220, Event=Down, log2FC=-Inf, padj=0.000432533284720616 |  |
| 16230 | cellexp | id=ENSG00000136573, name=BLK, PrEC=2, str=4, LNCaP=6, str=0, DU145=168, str=97 |  |
| 16230 | tcgaexp | gene=BLK, entrez=640, pos=chr8:11351521-11422108(+), B=29, L=35, M=30, H=63 |  |