DMR 1673 chr3:55672401-55672600 (200bp)
| DMR Stats | |
|---|---|
| Position | chr3:55672401-55672600 (View on UCSC) |
| Width | 200bp |
| Genomic Context | intron |
| Nearest Genes | ERC2 (0bp away) |
| ANODEV p-value | 0.00433424187686 |
| Frequencies | Benign: 0.0 (0.0%), Low: 4.0 (66.67%), High: 3.0 (33.33 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1673 | ERC2 | 20282 | uc003dhq.1 | chr3 | 55542336 | 55984588 | - | 200 | 100.0 | 0.14 | 1 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0) | 0.0 |
| 1673 | ERC2 | 20282 | uc003dhr.1 | chr3 | 55542336 | 56502391 | - | 200 | 100.0 | 0.37 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0), I16 (100), E17 (0) | 0.0 |
- 2 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 1673 | chr3 | 55672341 | 55672595 | wgEncodeRegDnaseClusteredV2 | 12 | score:300, srow:809782 |
| 1673 | chr3 | 55672426 | 55672439 | tfbsConsSites | V$CEBPB_01 | score:911, zScore:2.24, srow:3378728 |
| 1673 | chr3 | 55672436 | 55672457 | tfbsConsSites | V$OLF1_01 | score:815, zScore:2.02, srow:3378729 |
| 1673 | chr3 | 55672437 | 55672449 | tfbsConsSites | V$IK1_01 | score:846, zScore:1.64, srow:3378730 |
| 1673 | chr3 | 55672444 | 55672465 | tfbsConsSites | V$TCF11MAFG_01 | score:743, zScore:1.69, srow:3378731 |
| 1673 | chr3 | 55672534 | 55672547 | tfbsConsSites | V$FOXJ2_02 | score:882, zScore:2.44, srow:3378732 |
| 1673 | chr3 | 55672538 | 55672555 | tfbsConsSites | V$CART1_01 | score:799, zScore:1.98, srow:3378733 |
| 1673 | chr3 | 55672560 | 55672572 | tfbsConsSites | V$NKX61_01 | score:869, zScore:2.38, srow:3378734 |
| 1673 | chr3 | 55672574 | 55672588 | tfbsConsSites | V$SRF_C | score:791, zScore:1.8, srow:3378735 |
| 1673 | chr3 | 55672575 | 55672591 | tfbsConsSites | V$HNF1_C | score:806, zScore:1.91, srow:3378736 |
| 1673 | chr3 | 55672576 | 55672588 | tfbsConsSites | V$TCF11_01 | score:951, zScore:2.34, srow:3378737 |
| 1673 | chr3 | 55672577 | 55672586 | tfbsConsSites | V$CDPCR3HD_01 | score:883, zScore:1.65, srow:3378738 |
| 1673 | chr3 | 55672281 | 55672451 | phastConsElements100way | lod=488 | score:606, srow:5853140 |
| 1673 | chr3 | 55672463 | 55672470 | phastConsElements100way | lod=17 | score:274, srow:5853141 |
| 1673 | chr3 | 55672473 | 55672502 | phastConsElements100way | lod=78 | score:425, srow:5853142 |
| 1673 | chr3 | 55672506 | 55672512 | phastConsElements100way | lod=30 | score:330, srow:5853143 |
| 1673 | chr3 | 55672519 | 55672620 | phastConsElements100way | lod=367 | score:578, srow:5853144 |
- 17 featuress
