DMR 168 chr1:25444201-25444350 (150bp)

DMR Stats
Positionchr1:25444201-25444350 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesSYF2 (104416bp away)
ANODEV p-value0.00329759230752
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
168 chr1 25443981 25444295 wgEncodeRegDnaseClusteredV2 48 score:575, srow:20523
168 chr1 25443893 25444351 wgEncodeRegTfbsClusteredV3 CTCF score:1000, expCount:73, expNums:0,2,5,9,12,14,24,39,44,48,72,137,174,213,267,290,493,595,597,598,601,603,604,605,606,607,609,612,615,618,621,627,628,629,630,631,635,638,645,647,648,650,651,652,653,654,655,656,658,659,660,662,663,664,665,666,667,669,671,672,673,675,676,677,678,679,680,681,683,685,686,687,688, expScores:577,307,976,808,597,341,577,437,135,161,122,1000,1000,607,141,353,620,444,141,588,702,1000,836,920,425,598,666,608,364,112,806,1000,1000,1000,838,1000,1000,149,328,222,500,977,499,780,1000,423,486,329,118,379,136,267,493,526,506,297,621,201,594,186,267,162,117,121,174,553,604,239,226,529,544,210,667, srow:69083
168 chr1 25443894 25444409 wgEncodeRegTfbsClusteredV3 TFAP2C score:187, expCount:1, expNums:370, expScores:187, srow:69084
168 chr1 25443918 25444247 wgEncodeRegTfbsClusteredV3 CHD2 score:173, expCount:1, expNums:345, expScores:173, srow:69085
168 chr1 25443947 25444270 wgEncodeRegTfbsClusteredV3 E2F6 score:131, expCount:1, expNums:215, expScores:131, srow:69086
168 chr1 25443953 25444288 wgEncodeRegTfbsClusteredV3 YY1 score:205, expCount:1, expNums:162, expScores:205, srow:69087
168 chr1 25443982 25444282 wgEncodeRegTfbsClusteredV3 SMC3 score:748, expCount:4, expNums:313,408,450,535, expScores:242,316,748,311, srow:69088
168 chr1 25443997 25444286 wgEncodeRegTfbsClusteredV3 ZNF143 score:224, expCount:1, expNums:361, expScores:224, srow:69089
168 chr1 25443998 25444270 wgEncodeRegTfbsClusteredV3 RAD21 score:1000, expCount:9, expNums:108,149,193,231,264,310,355,405,448, expScores:156,1000,1000,254,173,137,669,209,534, srow:69090
168 chr1 25444044 25444243 wgEncodeRegTfbsClusteredV3 USF1 score:189, expCount:1, expNums:202, expScores:189, srow:69091
  • 10 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
168 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 0
168 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305