DMR 16925 chr9:24901-25100 (200bp)
| DMR Stats | |
|---|---|
| Position | chr9:24901-25100 (View on UCSC) |
| Width | 200bp |
| Genomic Context | promoter |
| Nearest Genes | WASH1 (0bp away) |
| ANODEV p-value | 0.0238651884701 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 2.0 (22.22 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16925 | WASH1 | 29103 | uc010mgm.1 | chr9 | 14511 | 29739 | - | 200 | 100.0 | 0.26 | 0 | 0.0 | E1 (0), I1 (48.5), E2 (52), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) | 0.0 |
| 16925 | WASH1 | 29103 | uc010mgp.1 | chr9 | 17719 | 25004 | - | 104 | 52.0 | 0.21 | 1 | 100.0 | E1 (52), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
| 16925 | WASH1 | 29103 | uc011llq.1 | chr9 | 16188 | 25004 | - | 104 | 52.0 | 0.21 | 1 | 100.0 | E1 (52), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) | 0.0 |
| 16925 | WASH1 | 29103 | uc022bcs.1 | chr9 | 15081 | 29587 | - | 200 | 100.0 | 0.83 | 1 | 0.0 | E1 (0), I1 (48.5), E2 (52), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) | 0.0 |
- 4 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 16925 | chr9 | 24899 | 24933 | phastConsElements100way | lod=216 | score:526, srow:9110493 |
| 16925 | chr9 | 24935 | 24951 | phastConsElements100way | lod=132 | score:477, srow:9110494 |
| 16925 | chr9 | 24953 | 24953 | phastConsElements100way | lod=13 | score:247, srow:9110495 |
| 16925 | chr9 | 24956 | 24957 | phastConsElements100way | lod=26 | score:316, srow:9110496 |
| 16925 | chr9 | 24959 | 24985 | phastConsElements100way | lod=140 | score:483, srow:9110497 |
| 16925 | chr9 | 24992 | 25006 | phastConsElements100way | lod=39 | score:356, srow:9110498 |
| 16925 | chr9 | 24850 | 26849 | cpgShelf | — | values(x.gr)[overs$srow, ]:40063 |
- 7 featuress
