DMR 18137 chr10:128221651-128221850 (200bp)

DMR Stats
Positionchr10:128221651-128221850 (View on UCSC)
Width200bp
Genomic Contextintron
Nearest GenesC10orf90 (0bp away)
ANODEV p-value0.0456063908806
FrequenciesBenign: 5.0 (71.43%), Low: 1.0 (16.67%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
18137 C10orf90 4006 uc009yao.2 chr10 128153265 128359079 - 200 100.0 1.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
18137 C10orf90 4006 uc010qum.2 chr10 128113574 128359079 - 200 100.0 1.21 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) 0.0
  • 2 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
18137 chr10 128221766 128222495 wgEncodeRegDnaseClusteredV2 7 score:200, srow:179113
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
18137 cellmeth_recounts PrEC: 13, LNCaP: 50, DU145: 72
18137 cellmeth_diffreps_PrECvsDU145 A=20, B=56, Length=380, Event=Up, log2FC=1.49, padj=0.00108186959093424
18137 cellmeth_diffreps_LNCaPvsDU145 A=40.62, B=12.16, Length=200, Event=Down, log2FC=-1.74, padj=0.00569596064766745
18137 cellmeth_diffreps_LNCaPvsDU145 A=7.48, B=47.71, Length=340, Event=Up, log2FC=2.67, padj=3.01921895099831e-06
18137 cellexp id=ENSG00000154493, name=C10orf90, PrEC=1, str=0, LNCaP=2, str=1, DU145=1, str=1
18137 tcgaexp gene=DUX4, entrez=22947, pos=chr10:76142-191000255(+), B=0, L=0, M=0, H=0
18137 tcgaexp gene=FAM45B, entrez=55855, pos=chr10:120863611-129631421(+), B=500, L=423, M=440, H=462
18137 tcgaexp gene=C10orf90, entrez=118611, pos=chr10:128113574-128359079(-), B=3, L=2, M=1, H=2