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DMineR: Prostate Cancer
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DMR List
DMR 18231
chr11:385701-385850 (150bp)
DMR Stats
Position
chr11:385701-385850 (View on UCSC)
Width
150bp
Genomic Context
intergenic
Nearest Genes
B4GALNT4 (3583bp away)
ANODEV p-value
0.0170223481516
Frequencies
Benign: 6.0 (85.71%), Low: 1.0 (16.67%), High: 8.0 (88.89 %)
Frequent?
Region Count Boxplot
Region Overview
Gene Overlaps
Dmrid
Gene Symbol
Gene Id
Isoform Id
Isoform Chr
Isoform Start
Isoform End
Isoform Strand
Overlap Bp
Query Overlap Per
Isoform Overlap Per
Noncoding
Promoter Per
Exonintron Per
End Per
Feature Overlaps
Dmrid
Feature Chr
Feature Start
Feature End
Set
Name
Fields
Omics Overlaps
Dmrid
Omic Set
Data
Plot
18231
cellmeth_recounts
PrEC: 19, LNCaP: 6, DU145: 5
18231
cellmeth_diffreps_PrECvsLNCaP
A=29, B=5, Length=300, Event=Down, log2FC=-2.54, padj=0.000608582658421329
18231
cellmeth_diffreps_PrECvsDU145
A=29, B=4, Length=360, Event=Down, log2FC=-2.86, padj=0.00021328361142465