DMR 1891 chr3:147125451-147125600 (150bp)

DMR Stats
Positionchr3:147125451-147125600 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesZIC4 (854bp away)
ANODEV p-value0.00115673510302
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
1891 chr3 147124906 147126215 wgEncodeRegDnaseClusteredV2 35 score:1000, srow:842700
1891 chr3 147124773 147126640 wgEncodeRegTfbsClusteredV3 EZH2 score:581, expCount:4, expNums:6,21,36,38, expScores:369,505,215,194, srow:2906297
1891 chr3 147124861 147125460 wgEncodeRegTfbsClusteredV3 CTBP2 score:202, expCount:1, expNums:348, expScores:202, srow:2906298
1891 chr3 147125437 147125452 tfbsConsSites V$S8_01 score:858, zScore:1.81, srow:3581230
1891 chr3 147125438 147125451 tfbsConsSites V$CHX10_01 score:834, zScore:2.24, srow:3581232
1891 chr3 147125453 147125467 tfbsConsSites V$OCT1_02 score:966, zScore:3.97, srow:3581233
1891 chr3 147125573 147125587 tfbsConsSites V$TATA_01 score:905, zScore:2.47, srow:3581234
1891 chr3 147125588 147125600 tfbsConsSites V$NKX61_01 score:836, zScore:1.83, srow:3581235
1891 chr3 147125588 147125603 tfbsConsSites V$S8_01 score:866, zScore:1.93, srow:3581236
1891 chr3 147125591 147125600 tfbsConsSites V$LHX3_01 score:888, zScore:1.65, srow:3581237
1891 chr3 147125592 147125606 tfbsConsSites V$PBX1_02 score:842, zScore:2.5, srow:3581238
1891 chr3 147125147 147126336 vistaEnhancers element_1043 score:900, srow:867
1891 chr3 147125298 147125469 phastConsElements100way lod=1277 score:701, srow:6173348
1891 chr3 147125473 147125486 phastConsElements100way lod=41 score:361, srow:6173349
1891 chr3 147125490 147125494 phastConsElements100way lod=13 score:247, srow:6173350
1891 chr3 147125498 147125522 phastConsElements100way lod=71 score:415, srow:6173351
1891 chr3 147125559 147125618 phastConsElements100way lod=421 score:592, srow:6173352
1891 chr3 147124989 147126988 cpgShore — values(x.gr)[overs$srow, ]:34415
  • 18 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
1891 cellmeth_recounts PrEC: 0, LNCaP: 1, DU145: 3
1891 cellexp id=ENSG00000152977, name=ZIC1, PrEC=0, str=0, LNCaP=0, str=0, DU145=601, str=502