DMR 19247 chr12:53834351-53834500 (150bp)

DMR Stats
Positionchr12:53834351-53834500 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesPRR13, PCBP2 (932bp away)
ANODEV p-value0.00720471046658
FrequenciesBenign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
19247 chr12 53833296 53835295 cpgShore — values(x.gr)[overs$srow, ]:9941
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
19247 cellmeth_recounts PrEC: 5, LNCaP: 8, DU145: 12
19247 cellmeth_diffreps_PrECvsDU145 A=2, B=29, Length=380, Event=Up, log2FC=3.86, padj=8.50006051060443e-06
19247 tcgaexp gene=ZNF26, entrez=7574, pos=chr12:93510-133589154(+), B=419, L=392, M=412, H=512
19247 tcgaexp gene=ZNF84, entrez=7637, pos=chr12:42780-133639885(+), B=1626, L=1649, M=1716, H=2045