DMR 1925 chr3:160756001-160756150 (150bp)

DMR Stats
Positionchr3:160756001-160756150 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesPPM1L (0bp away)
ANODEV p-value0.00809989565232
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
1925 PPM1L 20953 uc003fdr.3 chr3 160473996 160788817 + 150 100.0 2.25 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0) 0.0
1925 PPM1L 20953 uc003fds.3 chr3 160560001 160788817 + 150 100.0 6.75 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0) 0.0
1925 PPM1L 20953 uc003fdt.3 chr3 160560001 160788817 + 150 100.0 2.25 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0) 0.0
1925 PPM1L 20953 uc010hwf.3 chr3 160588386 160788817 + 150 100.0 0.49 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0) 0.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
1925 chr3 160756095 160756118 phastConsElements100way lod=14 score:255, srow:6222672
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
1925 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 14
1925 cellmeth_diffreps_PrECvsDU145 A=0, B=11, Length=220, Event=Up, log2FC=Inf, padj=0.00313959514768542
1925 cellexp id=ENSG00000163590, name=PPM1L, PrEC=167, str=245, LNCaP=479, str=643, DU145=327, str=242
1925 tcgaexp gene=PPM1L, entrez=151742, pos=chr3:160473996-160788817(+), B=400, L=200, M=252, H=220