DMR 1945 chr3:173943451-173943600 (150bp)

DMR Stats
Positionchr3:173943451-173943600 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesNLGN1 (0bp away)
ANODEV p-value0.00941336834781
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 3.0 (33.33 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
1945 NLGN1 21013 uc003fio.1 chr3 173116244 174001116 + 150 100.0 0.3 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
1945 NLGN1 21013 uc003fip.1 chr3 173302477 174001116 + 150 100.0 0.3 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
1945 NLGN1 21013 uc010hww.1 chr3 173302477 173997440 + 150 100.0 0.26 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0) 0.0
1945 NLGN1 21013 uc021xhm.1 chr3 173322069 174001116 + 150 100.0 0.35 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
1945 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 6
1945 cellexp id=ENSG00000169760, name=NLGN1, PrEC=0, str=0, LNCaP=132, str=85, DU145=1, str=0
1945 tcgaexp gene=NLGN1, entrez=22871, pos=chr3:173116244-174001116(+), B=224, L=68, M=103, H=258