DMR 20845 chr15:89169551-89169750 (200bp)

DMR Stats
Positionchr15:89169551-89169750 (View on UCSC)
Width200bp
Genomic Contextpromoter
Nearest GenesAEN (0bp away)
ANODEV p-value0.00377273465095
FrequenciesBenign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
20845 AEN 10241 uc002bmt.2 chr15 89164527 89175512 + 200 100.0 0.32 0 0.0 E1 (0), I1 (0), E2 (100), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
20845 AEN 10241 uc010bnl.2 chr15 89164527 89170572 + 200 100.0 0.43 0 0.0 E1 (0), I1 (0), E2 (100) 89.0
20845 AEN 10241 uc010bnm.1 chr15 89169377 89175512 + 200 100.0 0.32 0 100.0 E1 (100), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0) 0.0
  • 3 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
20845 chr15 89169346 89169675 wgEncodeRegDnaseClusteredV2 4 score:217, srow:419321
20845 chr15 89169598 89170073 wgEncodeRegTfbsClusteredV3 POLR2A score:349, expCount:3, expNums:146,445,610, expScores:349,137,127, srow:1416896
20845 chr15 89169554 89169568 tfbsConsSites V$SRF_C score:789, zScore:1.77, srow:1830146
20845 chr15 89169573 89169586 tfbsConsSites V$CEBP_Q2 score:884, zScore:1.75, srow:1830147
20845 chr15 89169692 89169692 cosmic COSM1517928 srow:414178
20845 chr15 89169692 89169692 cosmic COSM219656 srow:414179
20845 chr15 89169733 89169733 cosmic COSM1301532 srow:414180
20845 chr15 89169735 89169735 cosmic COSM1649183 srow:414181
20845 chr15 89169735 89169735 cosmic COSM556428 srow:414182
20845 chr15 89169546 89169556 phastConsElements100way lod=72 score:417, srow:3162262
20845 chr15 89169558 89169574 phastConsElements100way lod=72 score:417, srow:3162263
20845 chr15 89169577 89169600 phastConsElements100way lod=113 score:461, srow:3162264
20845 chr15 89169720 89169724 phastConsElements100way lod=17 score:274, srow:3162265
  • 13 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
20845 cellmeth_recounts PrEC: 9, LNCaP: 4, DU145: 1
20845 cellmeth_diffreps_PrECvsLNCaP A=80, B=10, Length=460, Event=Down, log2FC=-3, padj=3.98571079492545e-13
20845 cellmeth_diffreps_PrECvsDU145 A=80, B=2, Length=480, Event=Down, log2FC=-5.32, padj=0
20845 cellexp id=ENSG00000181026, name=AEN, PrEC=3296, str=2216, LNCaP=3228, str=3383, DU145=1810, str=5756
20845 tcgaexp gene=AEN, entrez=64782, pos=chr15:89164527-89175512(+), B=1312, L=1716, M=1606, H=1389