DMR 212 chr1:36101351-36101500 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:36101351-36101500 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | PSMB2 (0bp away) |
| ANODEV p-value | 0.00262914116177 |
| Frequencies | Benign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212 | PSMB2 | 639 | uc001bzd.2 | chr1 | 36035413 | 36107445 | - | 150 | 100.0 | 0.12 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) | 0.0 |
| 212 | PSMB2 | 639 | uc001bzf.2 | chr1 | 36065143 | 36107445 | - | 150 | 100.0 | 0.2 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
| 212 | PSMB2 | 639 | uc010ohz.2 | chr1 | 36065143 | 36107152 | - | 150 | 100.0 | 0.16 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) | 0.0 |
- 3 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 212 | chr1 | 36101498 | 36101513 | phastConsElements100way | lod=23 | score:304, srow:149900 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 212 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 0 |  |
| 212 | cellexp | id=ENSG00000126067, name=PSMB2, PrEC=12821, str=7937, LNCaP=6510, str=10040, DU145=8936, str=12531 |  |
| 212 | tcgaexp | gene=PSMB2, entrez=5690, pos=chr1:36035413-36107445(-), B=4107, L=4270, M=4190, H=4332 |  |
| 212 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |