DMR 22130 chr17:73114801-73114950 (150bp)
| DMR Stats | |
|---|---|
| Position | chr17:73114801-73114950 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | ARMC7 (0bp away) |
| ANODEV p-value | 0.0483701472541 |
| Frequencies | Benign: 5.0 (71.43%), Low: 1.0 (16.67%), High: 8.0 (88.89 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22130 | ARMC7 | 13382 | uc002jmw.1 | chr17 | 73106082 | 73126360 | + | 150 | 100.0 | 1.08 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) | 0.0 |
| 22130 | ARMC7 | 13382 | uc010dga.1 | chr17 | 73110386 | 73126360 | + | 150 | 100.0 | 0.23 | 1 | 0.0 | E1 (0), I1 (100), E2 (0) | 0.0 |
| 22130 | ARMC7 | 13382 | uc010wru.1 | chr17 | 73106082 | 73126360 | + | 150 | 100.0 | 0.31 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0) | 0.0 |
- 3 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 22130 | chr17 | 73114766 | 73115030 | wgEncodeRegDnaseClusteredV2 | 2 | score:140, srow:515987 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 22130 | cellmeth_recounts | PrEC: 12, LNCaP: 5, DU145: 5 |  |
| 22130 | cellmeth_diffreps_PrECvsLNCaP | A=109, B=17, Length=440, Event=Down, log2FC=-2.68, padj=0 |  |
| 22130 | cellmeth_diffreps_PrECvsDU145 | A=109, B=5, Length=440, Event=Down, log2FC=-4.45, padj=0 |  |
| 22130 | cellexp | id=ENSG00000125449, name=ARMC7, PrEC=637, str=549, LNCaP=706, str=704, DU145=2520, str=2823 |  |
| 22130 | tcgaexp | gene=ARMC7, entrez=79637, pos=chr17:73106082-73126360(+), B=1056, L=987, M=1019, H=851 |  |