DMR Stats | |
---|---|
Position | chr17:73843551-73843700 (View on UCSC) |
Width | 150bp |
Genomic Context | promoter |
Nearest Genes | WBP2 (0bp away) |
ANODEV p-value | 0.00371720029051 |
Frequencies | Benign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 8.0 (88.89 %) |
Frequent? |
Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
22149 | WBP2 | 13412 | uc002jps.3 | chr17 | 73841780 | 73851501 | - | 150 | 100.0 | 0.37 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (7.33), E6 (82), I6 (11.33), E7 (0), I7 (0), E8 (0) | 0.0 |
22149 | WBP2 | 13412 | uc010wsl.2 | chr17 | 73841780 | 73851501 | - | 150 | 100.0 | 0.37 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (7.33), E7 (82), I7 (11.33), E8 (0), I8 (0), E9 (0) | 0.0 |
22149 | WBP2 | 13412 | uc010wsm.2 | chr17 | 73841780 | 73851501 | - | 150 | 100.0 | 0.37 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (7.33), E5 (82), I5 (11.33), E6 (0), I6 (0), E7 (0) | 0.0 |
22149 | WBP2 | 13412 | uc010wsn.1 | chr17 | 73843181 | 73851501 | - | 150 | 100.0 | 0.37 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (7.33), E5 (93.33) | 100.0 |
Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
---|---|---|---|---|---|---|
22149 | chr17 | 73842953 | 73843576 | wgEncodeRegTfbsClusteredV3 | TCF7L2 | score:238, expCount:1, expNums:453, expScores:238, srow:1789246 |
22149 | chr17 | 73843021 | 73843636 | wgEncodeRegTfbsClusteredV3 | MYBL2 | score:409, expCount:1, expNums:186, expScores:409, srow:1789250 |
22149 | chr17 | 73843075 | 73843618 | wgEncodeRegTfbsClusteredV3 | NFIC | score:429, expCount:1, expNums:187, expScores:429, srow:1789253 |
22149 | chr17 | 73843162 | 73843561 | wgEncodeRegTfbsClusteredV3 | MXI1 | score:742, expCount:1, expNums:441, expScores:742, srow:1789258 |
22149 | chr17 | 73843562 | 73843573 | tfbsConsSites | V$AREB6_02 | score:896, zScore:1.67, srow:2257059 |
22149 | chr17 | 73843605 | 73843620 | tfbsConsSites | V$ARP1_01 | score:821, zScore:2.32, srow:2257060 |
22149 | chr17 | 73843626 | 73843639 | tfbsConsSites | V$RREB1_01 | score:871, zScore:2.69, srow:2257061 |
22149 | chr17 | 73843627 | 73843647 | tfbsConsSites | V$PAX4_01 | score:825, zScore:2.15, srow:2257062 |
22149 | chr17 | 73843659 | 73843673 | tfbsConsSites | V$PBX1_02 | score:810, zScore:1.95, srow:2257063 |
22149 | chr17 | 73843603 | 73843603 | cosmic | COSM1232507 | srow:521581 |
22149 | chr17 | 73843629 | 73843629 | cosmic | COSM437400 | srow:521582 |
22149 | chr17 | 73843671 | 73843671 | cosmic | COSM1386069 | srow:521583 |
22149 | chr17 | 73843560 | 73843589 | phastConsElements100way | lod=206 | score:521, srow:3853470 |
22149 | chr17 | 73843591 | 73843601 | phastConsElements100way | lod=58 | score:395, srow:3853471 |
22149 | chr17 | 73843603 | 73843607 | phastConsElements100way | lod=51 | score:383, srow:3853472 |
22149 | chr17 | 73843609 | 73843622 | phastConsElements100way | lod=140 | score:483, srow:3853473 |
22149 | chr17 | 73843624 | 73843631 | phastConsElements100way | lod=78 | score:425, srow:3853474 |
22149 | chr17 | 73843633 | 73843634 | phastConsElements100way | lod=35 | score:345, srow:3853475 |
22149 | chr17 | 73843636 | 73843649 | phastConsElements100way | lod=110 | score:459, srow:3853476 |
22149 | chr17 | 73843651 | 73843673 | phastConsElements100way | lod=126 | score:472, srow:3853477 |
22149 | chr17 | 73843675 | 73843676 | phastConsElements100way | lod=32 | score:337, srow:3853478 |
22149 | chr17 | 73843678 | 73843695 | phastConsElements100way | lod=128 | score:474, srow:3853479 |
Dmrid | Omic Set | Data | Plot |
---|---|---|---|
22149 | cellmeth_recounts | PrEC: 20, LNCaP: 9, DU145: 3 | |
22149 | cellmeth_diffreps_PrECvsLNCaP | A=28, B=5, Length=280, Event=Down, log2FC=-2.49, padj=0.000988859821164605 | |
22149 | cellmeth_diffreps_PrECvsDU145 | A=42, B=2, Length=600, Event=Down, log2FC=-4.39, padj=2.60431630396144e-09 | |
22149 | cellexp | id=ENSG00000132471, name=WBP2, PrEC=6538, str=5739, LNCaP=10854, str=7874, DU145=6895, str=4252 | |
22149 | tcgaexp | gene=WBP2, entrez=23558, pos=chr17:73841780-73851501(-), B=11095, L=11026, M=10602, H=9482 |