DMR 22569 chr18:57250801-57251050 (250bp)

DMR Stats
Positionchr18:57250801-57251050 (View on UCSC)
Width250bp
Genomic Contextintron
Nearest GenesCCBE1 (0bp away)
ANODEV p-value0.0432977047201
FrequenciesBenign: 6.0 (85.71%), Low: 2.0 (33.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
22569 CCBE1 14004 uc002lib.3 chr18 57098171 57364644 - 250 100.0 0.23 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
22569 chr18 57250506 57250815 wgEncodeRegDnaseClusteredV2 3 score:280, srow:546987
22569 chr18 57250841 57251115 wgEncodeRegDnaseClusteredV2 2 score:111, srow:546988
22569 chr18 57250842 57250857 tfbsConsSites V$RSRFC4_01 score:804, zScore:1.79, srow:2381845
22569 chr18 57250843 57250858 tfbsConsSites V$MEF2_01 score:809, zScore:2.77, srow:2381846
22569 chr18 57250812 57250818 phastConsElements100way lod=17 score:274, srow:4069518
22569 chr18 57250968 57250991 phastConsElements100way lod=16 score:268, srow:4069519
  • 6 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
22569 cellmeth_recounts PrEC: 3, LNCaP: 10, DU145: 3
22569 cellexp id=ENSG00000183287, name=CCBE1, PrEC=4113, str=1633, LNCaP=27, str=12, DU145=2602, str=2296
22569 tcgaexp gene=CCBE1, entrez=147372, pos=chr18:57098171-57364644(-), B=228, L=82, M=62, H=57