DMR 22675 chr19:601001-601150 (150bp)

DMR Stats
Positionchr19:601001-601150 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesHCN2 (0bp away)
ANODEV p-value0.00370572642415
FrequenciesBenign: 5.0 (71.43%), Low: 1.0 (16.67%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
22675 HCN2 14107 uc002lpe.3 chr19 589893 617159 + 150 100.0 0.04 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
22675 chr19 597972 601638 cpgShelf — values(x.gr)[overs$srow, ]:18718
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
22675 cellmeth_recounts PrEC: 10, LNCaP: 16, DU145: 13
22675 cellexp id=ENSG00000099822, name=HCN2, PrEC=21, str=57, LNCaP=167, str=75, DU145=93, str=77
22675 tcgaexp gene=HCN2, entrez=610, pos=chr19:589893-617159(+), B=30, L=39, M=75, H=78