DMR 22848 chr19:6395901-6396050 (150bp)

DMR Stats
Positionchr19:6395901-6396050 (View on UCSC)
Width150bp
Genomic Contextpromoter
Nearest GenesBC171868 (305bp away)
ANODEV p-value0.00398613009159
FrequenciesBenign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
22848 chr19 6395883 6397882 cpgShelf — values(x.gr)[overs$srow, ]:19261
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
22848 cellmeth_recounts PrEC: 14, LNCaP: 1, DU145: 17
22848 cellmeth_diffreps_PrECvsLNCaP A=22, B=1, Length=340, Event=Down, log2FC=-4.46, padj=5.80135062334059e-05
22848 cellmeth_diffreps_LNCaPvsDU145 A=1.07, B=19.64, Length=340, Event=Up, log2FC=4.2, padj=0.00100002095259888
22848 cellexp id=ENSG00000214347, name=CTB-180A7.8, PrEC=0, str=0, LNCaP=2, str=1, DU145=1, str=0