DMR 233 chr1:40557451-40557600 (150bp)

DMR Stats
Positionchr1:40557451-40557600 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesPPT1 (0bp away)
ANODEV p-value0.000380279842737
FrequenciesBenign: 0.0 (0.0%), Low: 0.0 (0.0%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
233 PPT1 711 uc001cfb.2 chr1 40538382 40563142 - 150 100.0 2.32 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) 0.0
233 PPT1 711 uc009vwa.2 chr1 40538382 40563142 - 150 100.0 0.78 1 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (100), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0) 0.0
233 PPT1 711 uc010ojf.1 chr1 40538382 40558179 - 150 100.0 1.04 0 0.0 E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0) 0.0
233 PPT1 711 uc010ojg.1 chr1 40538382 40563142 - 150 100.0 0.78 0 0.0 E1 (0), I1 (100), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0) 0.0
  • 4 geness

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields

Omics Overlaps

Dmrid Omic Set Data Plot
233 cellmeth_recounts PrEC: 0, LNCaP: 0, DU145: 6
233 cellexp id=ENSG00000131238, name=PPT1, PrEC=7087, str=5469, LNCaP=5907, str=9603, DU145=6922, str=10389
233 tcgaexp gene=PPT1, entrez=5538, pos=chr1:40538382-40563142(-), B=9070, L=9957, M=9346, H=8315
233 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305