DMR 2360 chr4:96179751-96180050 (300bp)
| DMR Stats | |
|---|---|
| Position | chr4:96179751-96180050 (View on UCSC) |
| Width | 300bp |
| Genomic Context | intron |
| Nearest Genes | UNC5C (0bp away) |
| ANODEV p-value | 0.000909022162102 |
| Frequencies | Benign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 2.0 (22.22 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2360 | UNC5C | 21871 | uc003hto.3 | chr4 | 96083656 | 96470361 | - | 300 | 100.0 | 0.41 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0), I14 (0), E15 (0), I15 (0), E16 (0) | 0.0 |
| 2360 | UNC5C | 21871 | uc003htq.3 | chr4 | 96137194 | 96470361 | - | 300 | 100.0 | 0.09 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) | 0.0 |
| 2360 | UNC5C | 21871 | uc010ilc.2 | chr4 | 96106198 | 96470361 | - | 300 | 100.0 | 0.37 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (100), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (0) | 0.0 |
- 3 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 2360 | chr4 | 96179767 | 96179770 | phastConsElements100way | lod=16 | score:268, srow:6615175 |
| 2360 | chr4 | 96179784 | 96179792 | phastConsElements100way | lod=28 | score:323, srow:6615176 |
- 2 featuress
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 2360 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 10 |  |
| 2360 | cellexp | id=ENSG00000182168, name=UNC5C, PrEC=1, str=16, LNCaP=85, str=42, DU145=0, str=0 |  |
| 2360 | tcgaexp | gene=UNC5C, entrez=8633, pos=chr4:96083656-96470361(-), B=169, L=78, M=81, H=69 |  |
| 2360 | tcgaexp | gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0 |  |