DMR 241 chr1:42845251-42845400 (150bp)

DMR Stats
Positionchr1:42845251-42845400 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesRIMKLA (1067bp away)
ANODEV p-value0.0322500057038
FrequenciesBenign: 0.0 (0.0%), Low: 2.0 (33.33%), High: 0.0 (0.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
241 chr1 42845378 42846033 wgEncodeRegTfbsClusteredV3 E2F1 score:557, expCount:1, expNums:572, expScores:557, srow:120628
241 chr1 42845387 42845906 wgEncodeRegTfbsClusteredV3 SIN3A score:225, expCount:1, expNums:357, expScores:225, srow:120629
241 chr1 42845334 42845338 phastConsElements100way lod=19 score:285, srow:185060
241 chr1 42843979 42845978 cpgShore — values(x.gr)[overs$srow, ]:1774
  • 4 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
241 cellmeth_recounts PrEC: 2, LNCaP: 1, DU145: 8
241 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305