DMR 24699 chrX:67943851-67944000 (150bp)
| DMR Stats | |
|---|---|
| Position | chrX:67943851-67944000 (View on UCSC) |
| Width | 150bp |
| Genomic Context | exon |
| Nearest Genes | STARD8 (0bp away) |
| ANODEV p-value | 0.0152895586582 |
| Frequencies | Benign: 5.0 (71.43%), Low: 2.0 (33.33%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24699 | STARD8 | 31001 | uc004dxa.3 | chrX | 67867511 | 67945684 | + | 150 | 100.0 | 0.32 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (75.33), I13 (25.33), E14 (0) | 0.0 |
| 24699 | STARD8 | 31001 | uc004dxb.3 | chrX | 67867511 | 67945684 | + | 150 | 100.0 | 0.43 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0), I13 (0), E14 (75.33), I14 (25.33), E15 (0) | 0.0 |
| 24699 | STARD8 | 31001 | uc004dxc.4 | chrX | 67913482 | 67945684 | + | 150 | 100.0 | 0.49 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (75.33), I13 (25.33), E14 (0) | 0.0 |
- 3 geness
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 24699 | chrX | 67943786 | 67944015 | wgEncodeRegDnaseClusteredV2 | 4 | score:214, srow:1266865 |
| 24699 | chrX | 67943917 | 67943935 | tfbsConsSites | V$AHRARNT_02 | score:775, zScore:1.75, srow:5635231 |
| 24699 | chrX | 67943945 | 67943956 | tfbsConsSites | V$E2F_03 | score:891, zScore:2.39, srow:5635232 |
| 24699 | chrX | 67943952 | 67943965 | tfbsConsSites | V$ATF_01 | score:824, zScore:1.69, srow:5635233 |
| 24699 | chrX | 67943953 | 67943964 | tfbsConsSites | V$CREBP1_Q2 | score:852, zScore:1.9, srow:5635234 |
| 24699 | chrX | 67943955 | 67943962 | tfbsConsSites | V$CREBP1CJUN_01 | score:900, zScore:1.74, srow:5635235 |
| 24699 | chrX | 67943955 | 67943962 | tfbsConsSites | V$CREB_01 | score:898, zScore:1.66, srow:5635236 |
| 24699 | chrX | 67943956 | 67943974 | tfbsConsSites | V$SEF1_C | score:784, zScore:2.93, srow:5635237 |
| 24699 | chrX | 67943851 | 67943851 | cosmic | COSM757760 | srow:1251969 |
| 24699 | chrX | 67943851 | 67943851 | cosmic | COSM757759 | srow:1251970 |
| 24699 | chrX | 67943859 | 67943859 | cosmic | COSM1558399 | srow:1251971 |
| 24699 | chrX | 67943859 | 67943859 | cosmic | COSM1558401 | srow:1251972 |
| 24699 | chrX | 67943859 | 67943859 | cosmic | COSM1558400 | srow:1251973 |
| 24699 | chrX | 67943937 | 67943938 | cosmic | COSM1469016 | srow:1251974 |
| 24699 | chrX | 67943937 | 67943938 | cosmic | COSM1469018 | srow:1251975 |
| 24699 | chrX | 67943937 | 67943938 | cosmic | COSM1469017 | srow:1251976 |
| 24699 | chrX | 67943848 | 67943855 | phastConsElements100way | lod=37 | score:351, srow:9781813 |
| 24699 | chrX | 67943866 | 67943867 | phastConsElements100way | lod=14 | score:255, srow:9781814 |
| 24699 | chrX | 67943869 | 67943870 | phastConsElements100way | lod=30 | score:330, srow:9781815 |
| 24699 | chrX | 67943872 | 67943873 | phastConsElements100way | lod=29 | score:327, srow:9781816 |
| 24699 | chrX | 67943876 | 67943879 | phastConsElements100way | lod=38 | score:354, srow:9781817 |
| 24699 | chrX | 67943882 | 67943890 | phastConsElements100way | lod=47 | score:375, srow:9781818 |
| 24699 | chrX | 67943893 | 67943912 | phastConsElements100way | lod=155 | score:493, srow:9781819 |
| 24699 | chrX | 67943914 | 67943915 | phastConsElements100way | lod=26 | score:316, srow:9781820 |
| 24699 | chrX | 67943917 | 67943918 | phastConsElements100way | lod=41 | score:361, srow:9781821 |
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Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 24699 | cellmeth_recounts | PrEC: 3, LNCaP: 3, DU145: 0 |  |
| 24699 | cellexp | id=ENSG00000130052, name=STARD8, PrEC=20, str=41, LNCaP=2, str=0, DU145=277, str=110 |  |
| 24699 | tcgaexp | gene=IL9R, entrez=3581, pos=chrX:59330252-155240482(+), B=6, L=4, M=6, H=9 |  |
| 24699 | tcgaexp | gene=VAMP7, entrez=6845, pos=chrX:59213949-155173433(+), B=2541, L=2446, M=2565, H=2891 |  |
| 24699 | tcgaexp | gene=STARD8, entrez=9754, pos=chrX:67867511-67945684(+), B=1169, L=650, M=528, H=501 |  |
| 24699 | tcgaexp | gene=SPRY3, entrez=10251, pos=chrX:59100457-155012117(+), B=156, L=117, M=100, H=75 |  |