DMR 24865 chr1:933651-934100 (450bp)

DMR Stats
Positionchr1:933651-934100 (View on UCSC)
Width450bp
Genomic Context3' end
Nearest GenesHES4 (241bp away)
ANODEV p-value0.000585884878716
FrequenciesBenign: 2.0 (28.57%), Low: 6.0 (100.0%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
24865 chr1 933081 933810 wgEncodeRegDnaseClusteredV2 10 score:410, srow:197
24865 chr1 933881 935235 wgEncodeRegDnaseClusteredV2 85 score:920, srow:198
24865 chr1 933325 934256 wgEncodeRegTfbsClusteredV3 EZH2 score:601, expCount:4, expNums:15,38,40,43, expScores:319,361,436,308, srow:874
24865 chr1 933327 933922 wgEncodeRegTfbsClusteredV3 ZNF263 score:327, expCount:1, expNums:368, expScores:327, srow:875
24865 chr1 933618 934057 wgEncodeRegTfbsClusteredV3 SIN3AK20 score:130, expCount:1, expNums:250, expScores:130, srow:876
24865 chr1 933895 934167 wgEncodeRegTfbsClusteredV3 CTCF score:244, expCount:10, expNums:137,174,213,290,595,598,609,621,667,679, expScores:192,158,130,118,202,244,163,208,162,133, srow:877
24865 chr1 933925 934164 wgEncodeRegTfbsClusteredV3 RAD21 score:233, expCount:1, expNums:149, expScores:233, srow:878
24865 chr1 933963 934167 wgEncodeRegTfbsClusteredV3 ZBTB7A score:160, expCount:1, expNums:247, expScores:160, srow:879
24865 chr1 933964 934133 wgEncodeRegTfbsClusteredV3 CTCFL score:119, expCount:1, expNums:214, expScores:119, srow:880
24865 chr1 933987 934193 wgEncodeRegTfbsClusteredV3 MAX score:221, expCount:1, expNums:223, expScores:221, srow:881
24865 chr1 933988 934164 wgEncodeRegTfbsClusteredV3 EGR1 score:624, expCount:1, expNums:216, expScores:624, srow:882
24865 chr1 934007 934154 wgEncodeRegTfbsClusteredV3 E2F6 score:189, expCount:1, expNums:215, expScores:189, srow:883
24865 chr1 933388 937410 cpgIsland CpG: 413 length:4023, cpgNum:413, gcNum:2728, perCpg:20.5, perGc:67.8, obsExp:0.89, srow:24
  • 13 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
24865 cellmeth_recounts PrEC: 76, LNCaP: 496, DU145: 18
24865 cellmeth_diffreps_PrECvsLNCaP A=164, B=449, Length=760, Event=Up, log2FC=1.45, padj=0
24865 cellmeth_diffreps_PrECvsDU145 A=293, B=18, Length=620, Event=Down, log2FC=-4.02, padj=0
24865 cellmeth_diffreps_LNCaPvsDU145 A=594.39, B=26.19, Length=1040, Event=Down, log2FC=-4.5, padj=0
24865 tcgameth site:cg15713103, B=0.34, L=0.55, H=0.4
24865 tcgameth site:cg23552821, B=0.16, L=0.3, H=0.22
24865 tcgameth site:cg26003967, B=0.2, L=0.4, H=0.28
24865 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
24865 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305