DMR 24914 chr1:3567151-3568050 (900bp)

DMR Stats
Positionchr1:3567151-3568050 (View on UCSC)
Width900bp
Genomic Contextpromoter
Nearest GenesWRAP73 (479bp away)
ANODEV p-value0.000465411970404
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
24914 chr1 3567121 3567175 wgEncodeRegDnaseClusteredV2 2 score:150, srow:2831
24914 chr1 3567226 3570175 wgEncodeRegDnaseClusteredV2 65 score:1000, srow:2832
24914 chr1 3566536 3567195 wgEncodeRegTfbsClusteredV3 KAP1 score:285, expCount:1, expNums:588, expScores:285, srow:9951
24914 chr1 3566909 3570034 wgEncodeRegTfbsClusteredV3 EZH2 score:1000, expCount:7, expNums:6,19,21,36,38,40,43, expScores:400,129,458,420,207,297,390, srow:9964
24914 chr1 3566955 3568367 wgEncodeRegTfbsClusteredV3 SUZ12 score:253, expCount:2, expNums:358,578, expScores:89,192, srow:9965
24914 chr1 3567938 3568135 wgEncodeRegTfbsClusteredV3 CTCF score:121, expCount:2, expNums:606,607, expScores:120,121, srow:9966
24914 chr1 3567951 3568550 wgEncodeRegTfbsClusteredV3 CTBP2 score:146, expCount:1, expNums:348, expScores:146, srow:9967
24914 chr1 3567148 3567155 tfbsConsSites V$TBP_01 score:974, zScore:1.77, srow:6743
24914 chr1 3567899 3567913 tfbsConsSites V$TAXCREB_01 score:799, zScore:2.09, srow:6744
24914 chr1 3567916 3567933 tfbsConsSites V$MIF1_01 score:762, zScore:1.66, srow:6745
24914 chr1 3566446 3569636 cpgIsland CpG: 284 length:3191, cpgNum:284, gcNum:1988, perCpg:17.8, perGc:62.3, obsExp:0.92, srow:281
  • 11 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
24914 cellmeth_recounts PrEC: 120, LNCaP: 491, DU145: 26
24914 cellmeth_diffreps_PrECvsLNCaP A=36, B=243, Length=740, Event=Up, log2FC=2.75, padj=0
24914 cellmeth_diffreps_PrECvsLNCaP A=52, B=155, Length=660, Event=Up, log2FC=1.58, padj=2.40197647658315e-11
24914 cellmeth_diffreps_PrECvsDU145 A=191, B=13, Length=760, Event=Down, log2FC=-3.88, padj=0
24914 cellmeth_diffreps_LNCaPvsDU145 A=515.28, B=23.39, Length=1500, Event=Down, log2FC=-4.46, padj=0
24914 cellexp id=ENSG00000116213, name=WRAP73, PrEC=1419, str=857, LNCaP=1740, str=1219, DU145=1092, str=961
24914 tcgameth site:cg01434649, B=0.6, L=0.77, H=0.74
24914 tcgameth site:cg04021697, B=0.16, L=0.57, H=0.52
24914 tcgameth site:cg04391111, B=0.28, L=0.37, H=0.33
24914 tcgameth site:cg07382920, B=0.29, L=0.49, H=0.5
24914 tcgameth site:cg10038618, B=0.47, L=0.65, H=0.61
24914 tcgameth site:cg12475507, B=0.62, L=0.74, H=0.7
24914 tcgameth site:cg16823083, B=0.32, L=0.63, H=0.62
24914 tcgameth site:cg20611911, B=0.33, L=0.6, H=0.54
24914 tcgameth site:cg21000072, B=0.25, L=0.45, H=0.42
24914 tcgameth site:cg24073122, B=0.26, L=0.51, H=0.48
24914 tcgameth site:cg24678611, B=0.46, L=0.64, H=0.62
24914 tcgameth site:cg25731359, B=0.38, L=0.51, H=0.54
24914 tcgameth site:cg26128092, B=0.26, L=0.38, H=0.43
24914 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
24914 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305