DMR 24971 chr1:8275651-8275850 (200bp)

DMR Stats
Positionchr1:8275651-8275850 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesSLC45A1 (108539bp away)
ANODEV p-value0.0133867607818
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
24971 chr1 8275196 8277195 cpgShore — values(x.gr)[overs$srow, ]:613
  • 1 features

Omics Overlaps

Dmrid Omic Set Data Plot
24971 cellmeth_recounts PrEC: 8, LNCaP: 39, DU145: 1
24971 cellmeth_diffreps_LNCaPvsDU145 A=36.35, B=0.94, Length=400, Event=Down, log2FC=-5.28, padj=2.0178306293507e-08
24971 tcgameth site:cg26931526, B=0.38, L=0.49, H=0.44
24971 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
24971 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305