DMR 25000 chr1:10948901-10949300 (400bp)

DMR Stats
Positionchr1:10948901-10949300 (View on UCSC)
Width400bp
Genomic Contextintergenic
Nearest GenesC1orf127 (57229bp away)
ANODEV p-value0.00963284399347
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 7.0 (77.78 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25000 chr1 10948821 10949115 wgEncodeRegDnaseClusteredV2 13 score:831, srow:8914
25000 chr1 10949186 10949515 wgEncodeRegDnaseClusteredV2 11 score:371, srow:8915
25000 chr1 10948905 10950179 wgEncodeRegTfbsClusteredV3 EZH2 score:555, expCount:4, expNums:21,36,38,43, expScores:555,259,220,440, srow:27961
25000 chr1 10949100 10949769 wgEncodeRegTfbsClusteredV3 RBBP5 score:179, expCount:1, expNums:8, expScores:179, srow:27962
25000 chr1 10949110 10949353 wgEncodeRegTfbsClusteredV3 JUND score:145, expCount:1, expNums:142, expScores:145, srow:27963
25000 chr1 10948876 10948903 tfbsConsSites V$PAX5_02 score:808, zScore:2.45, srow:23495
25000 chr1 10948894 10948903 tfbsConsSites V$CDPCR1_01 score:899, zScore:2.89, srow:23498
25000 chr1 10948909 10948929 tfbsConsSites V$PAX4_01 score:806, zScore:1.81, srow:23499
25000 chr1 10948932 10948943 tfbsConsSites V$AP2_Q6 score:886, zScore:1.83, srow:23500
25000 chr1 10948933 10948947 tfbsConsSites V$SPZ1_01 score:869, zScore:1.76, srow:23501
25000 chr1 10948936 10948948 tfbsConsSites V$SP1_Q6 score:952, zScore:2.4, srow:23502
25000 chr1 10948937 10948949 tfbsConsSites V$MAZR_01 score:866, zScore:1.82, srow:23503
25000 chr1 10948941 10948951 tfbsConsSites V$SREBP1_02 score:844, zScore:2.21, srow:23504
25000 chr1 10948976 10948984 tfbsConsSites V$STAT_01 score:903, zScore:1.69, srow:23505
25000 chr1 10948873 10948901 phastConsElements100way lod=84 score:432, srow:41882
25000 chr1 10948905 10949012 phastConsElements100way lod=247 score:539, srow:41883
25000 chr1 10949038 10949043 phastConsElements100way lod=17 score:274, srow:41884
25000 chr1 10949051 10949058 phastConsElements100way lod=25 score:312, srow:41885
25000 chr1 10949065 10949068 phastConsElements100way lod=16 score:268, srow:41886
  • 19 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25000 cellmeth_recounts PrEC: 63, LNCaP: 1465, DU145: 8
25000 cellmeth_diffreps_PrECvsLNCaP A=140, B=1666, Length=2360, Event=Up, log2FC=3.57, padj=0
25000 cellmeth_diffreps_PrECvsDU145 A=95, B=6, Length=460, Event=Down, log2FC=-3.98, padj=0
25000 cellmeth_diffreps_LNCaPvsDU145 A=1772.48, B=18.71, Length=2260, Event=Down, log2FC=-6.57, padj=0
25000 tcgameth site:cg04015962, B=0.69, L=0.88, H=0.87
25000 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
25000 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305