DMR 25004 chr1:11626901-11627050 (150bp)

DMR Stats
Positionchr1:11626901-11627050 (View on UCSC)
Width150bp
Genomic Contextintergenic
Nearest GenesPTCHD2 (29260bp away)
ANODEV p-value0.00981730104628
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 9.0 (100.0 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25004 chr1 11626786 11627690 wgEncodeRegDnaseClusteredV2 12 score:303, srow:9521
25004 chr1 11626902 11626904 phastConsElements100way lod=16 score:268, srow:45453
25004 chr1 11626942 11626948 phastConsElements100way lod=14 score:255, srow:45454
  • 3 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25004 cellmeth_recounts PrEC: 9, LNCaP: 0, DU145: 3
25004 cellmeth_diffreps_PrECvsLNCaP A=13, B=0, Length=360, Event=Down, log2FC=-Inf, padj=0.000827318446465587
25004 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
25004 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305