DMR 25019 chr1:13819301-13819450 (150bp)
| DMR Stats | |
|---|---|
| Position | chr1:13819301-13819450 (View on UCSC) |
| Width | 150bp |
| Genomic Context | intron |
| Nearest Genes | LRRC38 (0bp away) |
| ANODEV p-value | 0.00582989582581 |
| Frequencies | Benign: 1.0 (14.29%), Low: 6.0 (100.0%), High: 7.0 (77.78 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25019 | LRRC38 | 263 | uc001avb.3 | chr1 | 13801445 | 13840242 | - | 150 | 100.0 | 0.07 | 0 | 0.0 | E1 (0), I1 (100), E2 (0) | 0.0 |
- 1 genes
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 25019 | cellmeth_recounts | PrEC: 5, LNCaP: 0, DU145: 0 |  |
| 25019 | cellexp | id=ENSG00000162494, name=LRRC38, PrEC=0, str=0, LNCaP=0, str=0, DU145=0, str=0 |  |
| 25019 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 |  |
| 25019 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |