DMR 25058 chr1:17026151-17026300 (150bp)

DMR Stats
Positionchr1:17026151-17026300 (View on UCSC)
Width150bp
Genomic Contextintron
Nearest GenesESPNP (0bp away)
ANODEV p-value0.00319949907964
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per
25058 ESPNP 315 uc001azn.1 chr1 17017713 17046652 - 150 100.0 100.0 0 0.0 E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (100), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0) 0.0
  • 1 genes

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25058 chr1 17025861 17026655 wgEncodeRegDnaseClusteredV2 37 score:1000, srow:13122
25058 chr1 17025207 17028605 wgEncodeRegTfbsClusteredV3 EZH2 score:1000, expCount:9, expNums:6,15,17,19,21,36,38,40,43, expScores:336,561,208,179,524,394,378,268,362, srow:44872
25058 chr1 17025869 17026178 wgEncodeRegTfbsClusteredV3 EP300 score:190, expCount:1, expNums:145, expScores:190, srow:44874
25058 chr1 17026052 17026192 wgEncodeRegTfbsClusteredV3 USF1 score:531, expCount:1, expNums:161, expScores:531, srow:44875
25058 chr1 17026135 17026384 wgEncodeRegTfbsClusteredV3 CTCF score:598, expCount:2, expNums:612,666, expScores:598,326, srow:44876
25058 chr1 17026135 17026514 wgEncodeRegTfbsClusteredV3 E2F1 score:317, expCount:1, expNums:390, expScores:317, srow:44877
25058 chr1 17026137 17026396 wgEncodeRegTfbsClusteredV3 SMC3 score:196, expCount:1, expNums:408, expScores:196, srow:44878
25058 chr1 17026256 17026270 tfbsConsSites V$E47_01 score:858, zScore:1.69, srow:34954
25058 chr1 17026258 17026269 tfbsConsSites V$MYOD_01 score:890, zScore:1.75, srow:34955
25058 chr1 17026259 17026286 tfbsConsSites V$PAX5_01 score:767, zScore:1.75, srow:34956
25058 chr1 17026261 17026272 tfbsConsSites V$AP2_Q6 score:913, zScore:2.25, srow:34957
25058 chr1 17026264 17026275 tfbsConsSites V$EGR1_01 score:830, zScore:1.7, srow:34958
25058 chr1 17026267 17026288 tfbsConsSites V$HEN1_01 score:773, zScore:1.67, srow:34959
25058 chr1 17026252 17026266 phastConsElements100way lod=41 score:361, srow:64762
25058 chr1 17026278 17026284 phastConsElements100way lod=20 score:290, srow:64763
25058 chr1 17026288 17026294 phastConsElements100way lod=29 score:327, srow:64764
25058 chr1 17025924 17027942 cpgIsland CpG: 181 length:2019, cpgNum:181, gcNum:1379, perCpg:17.9, perGc:68.3, obsExp:0.77, srow:519
  • 17 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25058 cellmeth_recounts PrEC: 4, LNCaP: 1270, DU145: 32
25058 cellmeth_diffreps_PrECvsLNCaP A=83, B=3499, Length=2560, Event=Up, log2FC=5.4, padj=0
25058 cellmeth_diffreps_PrECvsDU145 A=68, B=6, Length=380, Event=Down, log2FC=-3.5, padj=8.91098394546962e-13
25058 cellmeth_diffreps_LNCaPvsDU145 A=3740.59, B=83.25, Length=2520, Event=Down, log2FC=-5.49, padj=0
25058 cellexp id=ENSG00000268869, name=ESPNP, PrEC=3, str=0, LNCaP=63, str=10, DU145=8, str=7
25058 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
25058 tcgaexp gene=ESPNP, entrez=284729, pos=chr1:17017713-17046652(-), B=1, L=1, M=1, H=1
25058 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305