DMR 25065 chr1:17796901-17797100 (200bp)

DMR Stats
Positionchr1:17796901-17797100 (View on UCSC)
Width200bp
Genomic Contextintergenic
Nearest GenesRCC2 (30650bp away)
ANODEV p-value0.00155089990145
FrequenciesBenign: 0.0 (0.0%), Low: 6.0 (100.0%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25065 chr1 17797001 17797190 wgEncodeRegDnaseClusteredV2 2 score:313, srow:13789
25065 chr1 17796600 17796923 wgEncodeRegTfbsClusteredV3 SP1 score:369, expCount:1, expNums:153, expScores:369, srow:47129
25065 chr1 17796674 17796917 wgEncodeRegTfbsClusteredV3 SIX5 score:143, expCount:1, expNums:152, expScores:143, srow:47133
25065 chr1 17796677 17797256 wgEncodeRegTfbsClusteredV3 ATF2 score:253, expCount:1, expNums:134, expScores:253, srow:47134
25065 chr1 17796986 17797601 wgEncodeRegTfbsClusteredV3 CHD1 score:238, expCount:1, expNums:4, expScores:238, srow:47136
  • 5 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25065 cellmeth_recounts PrEC: 7, LNCaP: 0, DU145: 0
25065 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
25065 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305