DMR 25076 chr1:18616751-18616950 (200bp)
| DMR Stats | |
|---|---|
| Position | chr1:18616751-18616950 (View on UCSC) |
| Width | 200bp |
| Genomic Context | intron |
| Nearest Genes | IGSF21 (0bp away) |
| ANODEV p-value | 0.00066201799385 |
| Frequencies | Benign: 1.0 (14.29%), Low: 4.0 (66.67%), High: 9.0 (100.0 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25076 | IGSF21 | 342 | uc001bau.2 | chr1 | 18434240 | 18704977 | + | 200 | 100.0 | 0.41 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (100), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (0), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0) | 0.0 |
- 1 genes
Feature Overlaps
| Dmrid | Feature Chr | Feature Start | Feature End | Set | Name | Fields |
|---|---|---|---|---|---|---|
| 25076 | chr1 | 18616721 | 18617015 | wgEncodeRegDnaseClusteredV2 | 3 | score:116, srow:14553 |
- 1 features
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 25076 | cellmeth_recounts | PrEC: 3, LNCaP: 1, DU145: 0 |  |
| 25076 | cellexp | id=ENSG00000117154, name=IGSF21, PrEC=1, str=0, LNCaP=0, str=0, DU145=0, str=0 |  |
| 25076 | tcgaexp | gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019 |  |
| 25076 | tcgaexp | gene=IGSF21, entrez=84966, pos=chr1:18434240-18704977(+), B=386, L=279, M=495, H=384 |  |
| 25076 | tcgaexp | gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305 |  |