DMR 25095 chr1:19600601-19600900 (300bp)

DMR Stats
Positionchr1:19600601-19600900 (View on UCSC)
Width300bp
Genomic Contextpromoter
Nearest GenesAKR7L (32bp away)
ANODEV p-value0.000139707025091
FrequenciesBenign: 1.0 (14.29%), Low: 5.0 (83.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25095 chr1 19600446 19601095 wgEncodeRegDnaseClusteredV2 35 score:639, srow:15443
25095 chr1 19600867 19601110 wgEncodeRegTfbsClusteredV3 REST score:135, expCount:1, expNums:144, expScores:135, srow:50388
25095 chr1 19600250 19600942 cpgIsland CpG: 72 length:693, cpgNum:72, gcNum:484, perCpg:20.8, perGc:69.8, obsExp:0.85, srow:570
  • 3 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25095 cellmeth_recounts PrEC: 28, LNCaP: 37, DU145: 19
25095 cellmeth_diffreps_PrECvsDU145 A=109, B=20, Length=780, Event=Down, log2FC=-2.45, padj=3.65648343852673e-14
25095 cellexp id=ENSG00000211454, name=AKR7L, PrEC=8, str=9, LNCaP=112, str=151, DU145=6, str=21
25095 tcgameth site:cg09045262, B=0.46, L=0.58, H=0.61
25095 tcgameth site:cg11376198, B=0.39, L=0.53, H=0.54
25095 tcgameth site:cg12798157, B=0.34, L=0.53, H=0.55
25095 tcgameth site:cg13935437, B=0.36, L=0.52, H=0.55
25095 tcgameth site:cg18202521, B=0.27, L=0.41, H=0.42
25095 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
25095 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305