DMR 25110 chr1:20799651-20800100 (450bp)

DMR Stats
Positionchr1:20799651-20800100 (View on UCSC)
Width450bp
Genomic Contextintergenic
Nearest GenesCAMK2N1 (8783bp away)
ANODEV p-value2.1482212185e-08
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 6.0 (66.67 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25110 chr1 20799681 20800135 wgEncodeRegDnaseClusteredV2 84 score:1000, srow:16484
25110 chr1 20799631 20800060 wgEncodeRegTfbsClusteredV3 E2F6 score:152, expCount:2, expNums:215,495, expScores:128,152, srow:53270
25110 chr1 20799644 20800151 wgEncodeRegTfbsClusteredV3 MYC score:285, expCount:3, expNums:487,488,489, expScores:285,122,233, srow:53271
25110 chr1 20799676 20799939 wgEncodeRegTfbsClusteredV3 NRF1 score:398, expCount:2, expNums:354,518, expScores:398,162, srow:53272
25110 chr1 20799686 20800041 wgEncodeRegTfbsClusteredV3 MAX score:480, expCount:2, expNums:223,511, expScores:480,275, srow:53273
25110 chr1 20799706 20800195 wgEncodeRegTfbsClusteredV3 TAF1 score:188, expCount:1, expNums:157, expScores:188, srow:53274
25110 chr1 20799716 20799985 wgEncodeRegTfbsClusteredV3 USF1 score:215, expCount:2, expNums:161,265, expScores:215,166, srow:53275
25110 chr1 20799775 20800157 wgEncodeRegTfbsClusteredV3 POLR2A score:402, expCount:3, expNums:61,62,596, expScores:402,276,199, srow:53276
25110 chr1 20800015 20800031 tfbsConsSites V$LUN1_01 score:716, zScore:1.88, srow:42437
25110 chr1 20800077 20800081 phastConsElements100way lod=13 score:247, srow:79412
  • 10 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25110 cellmeth_recounts PrEC: 4, LNCaP: 16, DU145: 6
25110 tcgameth site:cg05004665, B=0.32, L=0.54, H=0.52
25110 tcgameth site:cg06897478, B=0.36, L=0.63, H=0.61
25110 tcgameth site:cg15653910, B=0.29, L=0.53, H=0.51
25110 tcgaexp gene=SRSF10, entrez=10772, pos=chr1:36273-24306953(-), B=3487, L=3388, M=3432, H=4019
25110 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305