DMR 2513 chr4:173680751-173681050 (300bp)
| DMR Stats | |
|---|---|
| Position | chr4:173680751-173681050 (View on UCSC) |
| Width | 300bp |
| Genomic Context | intron |
| Nearest Genes | GALNTL6 (0bp away) |
| ANODEV p-value | 7.50922269154e-05 |
| Frequencies | Benign: 1.0 (14.29%), Low: 6.0 (100.0%), High: 2.0 (22.22 %) |
| Frequent? |
Region Count Boxplot
Region Overview
Gene Overlaps
| Dmrid | Gene Symbol | Gene Id | Isoform Id | Isoform Chr | Isoform Start | Isoform End | Isoform Strand | Overlap Bp | Query Overlap Per | Isoform Overlap Per | Noncoding | Promoter Per | Exonintron Per | End Per |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2513 | GALNTL6 | 22247 | uc003isv.3 | chr4 | 172734575 | 173961558 | + | 300 | 100.0 | 0.13 | 0 | 0.0 | E1 (0), I1 (0), E2 (0), I2 (0), E3 (0), I3 (0), E4 (0), I4 (0), E5 (0), I5 (100), E6 (0), I6 (0), E7 (0), I7 (0), E8 (0), I8 (0), E9 (0), I9 (0), E10 (0), I10 (0), E11 (0), I11 (0), E12 (0), I12 (0), E13 (0) | 0.0 |
- 1 genes
Feature Overlaps
Omics Overlaps
| Dmrid | Omic Set | Data | Plot |
|---|---|---|---|
| 2513 | cellmeth_recounts | PrEC: 0, LNCaP: 0, DU145: 1 |  |
| 2513 | cellexp | id=ENSG00000174473, name=GALNTL6, PrEC=0, str=5, LNCaP=38, str=30, DU145=1, str=0 |  |
| 2513 | tcgaexp | gene=GALNTL6, entrez=442117, pos=chr4:172734575-173961558(+), B=27, L=47, M=36, H=49 |  |
| 2513 | tcgaexp | gene=DUX4L5, entrez=653545, pos=chr4:72836-191010142(+), B=0, L=0, M=0, H=0 |  |