DMR 25169 chr1:27730001-27730150 (150bp)

DMR Stats
Positionchr1:27730001-27730150 (View on UCSC)
Width150bp
Genomic Context3' end
Nearest GenesWASF2 (583bp away)
ANODEV p-value0.000987401174641
FrequenciesBenign: 0.0 (0.0%), Low: 5.0 (83.33%), High: 8.0 (88.89 %)
Frequent?

Region Count Boxplot

Region Overview

Gene Overlaps

Dmrid Gene Symbol Gene Id Isoform Id Isoform Chr Isoform Start Isoform End Isoform Strand Overlap Bp Query Overlap Per Isoform Overlap Per Noncoding Promoter Per Exonintron Per End Per

Feature Overlaps

Dmrid Feature Chr Feature Start Feature End Set Name Fields
25169 chr1 27729461 27730255 wgEncodeRegDnaseClusteredV2 97 score:1000, srow:22461
25169 chr1 27729616 27730015 wgEncodeRegTfbsClusteredV3 WRNIP1 score:130, expCount:1, expNums:320, expScores:130, srow:79570
25169 chr1 27729668 27730377 wgEncodeRegTfbsClusteredV3 POLR2A score:561, expCount:4, expNums:105,336,340,577, expScores:561,240,256,168, srow:79572
25169 chr1 27729732 27730187 wgEncodeRegTfbsClusteredV3 CCNT2 score:166, expCount:1, expNums:476, expScores:166, srow:79574
25169 chr1 27729734 27730229 wgEncodeRegTfbsClusteredV3 HMGN3 score:131, expCount:1, expNums:501, expScores:131, srow:79575
25169 chr1 27729895 27730210 wgEncodeRegTfbsClusteredV3 MYC score:183, expCount:1, expNums:575, expScores:183, srow:79576
25169 chr1 27729923 27730198 wgEncodeRegTfbsClusteredV3 MAX score:230, expCount:1, expNums:576, expScores:230, srow:79577
25169 chr1 27730020 27730047 tfbsConsSites V$PAX5_01 score:778, zScore:1.92, srow:60048
25169 chr1 27729960 27730057 phastConsElements100way lod=381 score:582, srow:113251
25169 chr1 27730063 27730076 phastConsElements100way lod=67 score:410, srow:113252
25169 chr1 27730082 27730098 phastConsElements100way lod=24 score:308, srow:113253
25169 chr1 27730112 27730119 phastConsElements100way lod=29 score:327, srow:113254
25169 chr1 27730142 27730199 phastConsElements100way lod=206 score:521, srow:113255
  • 13 featuress

Omics Overlaps

Dmrid Omic Set Data Plot
25169 cellmeth_recounts PrEC: 7, LNCaP: 18, DU145: 3
25169 tcgameth site:cg14783891, B=0.56, L=0.69, H=0.68
25169 tcgaexp gene=LOC100133331, entrez=100133331, pos=chr1:322037-180753553(-), B=268, L=328, M=271, H=305